Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002536.1-P | Field mustard | plasma membrane | 92.42 | 92.42 |
| CDX80234 | Canola | plasma membrane | 90.96 | 90.96 |
| CDY66447 | Canola | peroxisome | 78.72 | 90.3 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 89.5 | 89.5 |
| AT5G59740.1 | Thale cress | plasma membrane | 86.59 | 86.34 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 88.05 | 78.65 |
| PGSC0003DMT400040212 | Potato | plasma membrane | 73.76 | 76.2 |
| VIT_06s0004g04070.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 75.8 | 75.58 |
| PGSC0003DMT400028218 | Potato | peroxisome, plasma membrane, vacuole | 52.48 | 75.0 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 64.43 | 73.18 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 73.47 | 72.83 |
| CDX71077 | Canola | cytosol | 87.46 | 69.77 |
| TraesCS1A01G044800.1 | Wheat | plasma membrane | 68.51 | 67.14 |
| TraesCS1D01G045400.1 | Wheat | plasma membrane | 68.22 | 66.86 |
| GSMUA_Achr6P33190_001 | Banana | extracellular | 27.7 | 66.43 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 67.64 | 66.29 |
| HORVU1Hr1G008350.2 | Barley | plasma membrane | 67.64 | 66.29 |
| Zm00001d035601_P001 | Maize | plasma membrane | 67.06 | 65.9 |
| Os05t0115700-01 | Rice | endoplasmic reticulum, plastid, vacuole | 68.51 | 65.28 |
| EES17597 | Sorghum | peroxisome, plasma membrane, vacuole | 66.76 | 63.79 |
| Zm00001d011038_P002 | Maize | plasma membrane | 66.47 | 63.51 |
| CDY41674 | Canola | plasma membrane | 27.99 | 28.92 |
| CDY49089 | Canola | plasma membrane | 27.41 | 28.4 |
| CDY39320 | Canola | plasma membrane | 27.41 | 28.4 |
| CDY33752 | Canola | plasma membrane | 27.41 | 28.4 |
| CDY09353 | Canola | plasma membrane | 27.99 | 26.3 |
| CDX94506 | Canola | extracellular | 7.0 | 25.0 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 21.28 | 20.86 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 20.7 | 20.29 |
| CDX94144 | Canola | plasma membrane | 20.99 | 20.0 |
| CDY41258 | Canola | plasma membrane | 21.87 | 18.75 |
| CDX98783 | Canola | plasma membrane | 19.53 | 17.87 |
| CDY10844 | Canola | plasma membrane | 20.99 | 16.71 |
Protein Annotations
| EnsemblPlants:CDY49577 | EnsemblPlantsGene:GSBRNA2T00093307001 | GO:A0A078II11 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:UAA | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF13 |
| PFAM:PF08449 | ProteinID:CDY49577 | ProteinID:CDY49577.1 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI0004EDDE9B | UniProt:A0A078II11 | MapMan:24.2.1.1.5 | : | : | : |
Description
BnaA10g12730DBnaA10g12730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078II11]
Coordinates
chrLK032843:-:81743..84079
Molecular Weight (calculated)
38381.2 Da
IEP (calculated)
8.513
GRAVY (calculated)
0.386
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEETVNGV KEENKLWKGV FAVSGIMFTL VIYGLLQEKI MRVPYGLNKE FFKYSLFLVF CNRLTTSAVS AAALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYFVAFLV TLGCSVFILF PAGDDISTYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLLAVDFV SRHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKSQSQPL PPELPQYEKA EGS
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYFVAFLV TLGCSVFILF PAGDDISTYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLLAVDFV SRHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKSQSQPL PPELPQYEKA EGS
001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
Arabidopsis Description
UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.