Factsheet for TraesCS1B01G058000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G045400.1	Wheat	plasma membrane	89.71	89.71
TraesCS1A01G044800.1	Wheat	plasma membrane	89.14	89.14
HORVU1Hr1G008350.2	Barley	plasma membrane	88.86	88.86
Os05t0115700-01	Rice	endoplasmic reticulum, plastid, vacuole	81.14	78.89
Zm00001d035601_P001	Maize	plasma membrane	78.29	78.51
EES17597	Sorghum	peroxisome, plasma membrane, vacuole	79.71	77.72
Zm00001d011038_P002	Maize	plasma membrane	79.43	77.44
PGSC0003DMT400040212	Potato	plasma membrane	70.0	73.8
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	61.14	70.86
CDY66447	Canola	peroxisome	60.29	70.57
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	47.71	69.58
VIT_06s0004g04070.t01	Wine grape	peroxisome, plasma membrane, vacuole	67.43	68.6
Bra002536.1-P	Field mustard	plasma membrane	67.14	68.51
AT5G59740.1	Thale cress	plasma membrane	67.14	68.31
CDY60561	Canola	cytosol, peroxisome, plasma membrane	66.57	67.93
CDX80234	Canola	plasma membrane	66.57	67.93
Solyc06g005290.2.1	Tomato	peroxisome	67.14	67.92
KRH10309	Soybean	plasma membrane	68.0	67.81
Bra006695.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.29	67.7
CDY49577	Canola	plasma membrane	66.29	67.64
KRH29863	Soybean	extracellular, mitochondrion, plasma membrane	42.0	67.43
KRH24858	Soybean	plasma membrane	68.0	67.42
GSMUA_Achr6P33190_001	Banana	extracellular	27.43	67.13
AT3G46180.1	Thale cress	peroxisome, plasma membrane, vacuole	65.14	65.71
KRH29862	Soybean	cytosol	25.43	65.44
KRH23010	Soybean	cytosol, peroxisome, plasma membrane	65.43	65.06
CDX88721	Canola	cytosol, peroxisome, plasma membrane	66.29	60.42
CDX71077	Canola	cytosol	66.0	53.72
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	28.57	28.01
CDX94506	Canola	extracellular	6.29	22.92
TraesCS4B01G353800.1	Wheat	plasma membrane	19.43	19.37

Protein Annotations

EnsemblPlants:TraesCS1B01G058000.1	EnsemblPlantsGene:TraesCS1B01G058000	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085	InterPro:UAA
PANTHER:PTHR10778	PANTHER:PTHR10778:SF13	PFAM:PF08449	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.1.5	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:40180461..40186307

Molecular Weight (calculated)

38879.0 Da

IEP (calculated)

9.288

GRAVY (calculated)

0.425

Length

350 amino acids

Sequence
(BLAST)

001: MADEPALPVA AGRDKDERRR LIGRCALAVV GIMSTLLVYG VLQEKLMRVP YGAEKEFFRY SLFLVFCNRI TTSMVSALVL LSSKKSTDPV APIQKYCVVS
101: FSNILTTTCQ YEALKYVSFP VQTLAKCAKM IPVMIWGTII MKKKYGGKDY FFAVIVTMGC SLFILYPASM DVSPLNKGRE STVWGVSLML GYLGFDGFTS
201: TFQDKLFKGY EMEIHNQIFY TTMCSCVISL SGLILQNHLL PAVDFMVRHP DCFYDVLILS TVATASQFFI SYTIRTFGAL TFATIMTTRQ LVSILLSCVW
301: FVHPLSWMQW VGAAIVFGAL YAKTFSRNKS QKAAVASSSS QGSVPNAANS

Best Arabidopsis Sequence Match ( AT5G59740.1 )
(BLAST)

001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS

Arabidopsis Description

UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.