Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 98.29 | 97.73 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 92.31 | 95.58 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 88.32 | 89.08 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 85.75 | 86.25 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 85.47 | 84.99 |
| Zm00001d048499_P001 | Maize | plasma membrane | 82.91 | 79.08 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 77.21 | 77.87 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 76.07 | 77.84 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 70.37 | 77.67 |
| Bra019340.1-P | Field mustard | plasma membrane | 76.35 | 77.46 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 75.5 | 75.71 |
| KRH00671 | Soybean | endoplasmic reticulum | 76.07 | 74.58 |
| KRH40518 | Soybean | plasma membrane | 76.07 | 74.58 |
| CDX94144 | Canola | plasma membrane | 76.35 | 74.44 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 74.07 | 74.29 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 74.07 | 74.29 |
| Bra016764.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 74.07 | 74.29 |
| AT1G12600.1 | Thale cress | plasma membrane | 73.79 | 74.21 |
| Bra013669.1-P | Field mustard | plasma membrane | 74.07 | 73.24 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 72.93 | 73.14 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 69.52 | 68.54 |
| AT4G23010.3 | Thale cress | plasma membrane | 75.5 | 67.6 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 53.28 | 67.51 |
| CDY41258 | Canola | plasma membrane | 74.36 | 65.25 |
| CDX98783 | Canola | plasma membrane | 68.95 | 64.53 |
| KRG88431 | Soybean | plasma membrane | 27.35 | 61.94 |
| CDY10844 | Canola | plasma membrane | 74.64 | 60.79 |
| KRH65169 | Soybean | plasma membrane | 39.03 | 44.63 |
| KRH65174 | Soybean | plasma membrane | 39.03 | 44.48 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 19.37 | 19.43 |
| TraesCS7B01G258500.1 | Wheat | golgi, mitochondrion, plastid | 18.52 | 18.21 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G353800.1 | EnsemblPlantsGene:TraesCS4B01G353800 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 | InterPro:UAA |
| PANTHER:PTHR10778 | PANTHER:PTHR10778:SF19 | PFAM:PF08449 | SUPFAM:SSF103481 | TMHMM:TMhelix | MapMan:24.2.1.1.5 |
Description
No Description!
Coordinates
chr4B:-:645428331..645431376
Molecular Weight (calculated)
39104.5 Da
IEP (calculated)
8.798
GRAVY (calculated)
0.397
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTGGEEQQG RRLFGVSLTD RPVWQQFLIC SSGFFFGYLV NGICEEYVYN RLQFSYGWYF TFVQGFVYLA LIRLQGFTMK HMVNPWRTYV RLSAVLMGSN
101: GLTKGSLAFL NYPAQIMFKS TKVLPVMIMG AFIPGLRRKY PFHEYVSAVM LVIGLILFTL ADAQTSPNFS MIGVAMVSSA LIMDAFLGNL QEAIFKMNPD
201: TTQMEMLFCS TVVGLPFLAV PMVLTGELTT AWSACSQHLY VYAVLVFEAM ATFVGQVSVL SLIALFGAAT TAMVTTARKA VTLLLSYLIF TKPMTEQHVT
301: GLLLITMGIV LRLLPEDKEK KGMAERQQAK AQRGEEKRRG DGVEEETSPL V
101: GLTKGSLAFL NYPAQIMFKS TKVLPVMIMG AFIPGLRRKY PFHEYVSAVM LVIGLILFTL ADAQTSPNFS MIGVAMVSSA LIMDAFLGNL QEAIFKMNPD
201: TTQMEMLFCS TVVGLPFLAV PMVLTGELTT AWSACSQHLY VYAVLVFEAM ATFVGQVSVL SLIALFGAAT TAMVTTARKA VTLLLSYLIF TKPMTEQHVT
301: GLLLITMGIV LRLLPEDKEK KGMAERQQAK AQRGEEKRRG DGVEEETSPL V
001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQHPYVYGV LVFEAMATFI GQVSVLSLIA LFGAATTALI TTARKGVTLL LSYLIFTKPL TEQHGSGLLL
301: IAMGIVLKMV PMDSKAPAKI PARPAVRIAG GDGDREEDEE RKSLV
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQHPYVYGV LVFEAMATFI GQVSVLSLIA LFGAATTALI TTARKGVTLL LSYLIFTKPL TEQHGSGLLL
301: IAMGIVLKMV PMDSKAPAKI PARPAVRIAG GDGDREEDEE RKSLV
Arabidopsis Description
UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.