Factsheet for Bra013669.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019340.1-P	Field mustard	plasma membrane	86.76	89.02
CDY41258	Canola	plasma membrane	99.72	88.5
HORVU4Hr1G085820.1	Barley	plasma membrane	74.65	78.17
AT4G23010.3	Thale cress	plasma membrane	86.2	78.06
CDY10844	Canola	plasma membrane	94.08	77.49
Bra016764.1-P	Field mustard	cytosol, peroxisome, plasma membrane	76.06	77.14
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	75.77	77.08
Solyc08g080270.2.1	Tomato	plasma membrane	69.01	77.04
KRH00671	Soybean	endoplasmic reticulum	77.46	76.82
KRH40518	Soybean	plasma membrane	77.18	76.54
VIT_02s0025g04490.t01	Wine grape	plasma membrane	75.21	76.29
VIT_15s0048g01060.t01	Wine grape	plasma membrane	73.8	75.29
TraesCS4D01G347700.1	Wheat	plasma membrane	73.24	74.71
TraesCS4B01G353800.1	Wheat	plasma membrane	73.24	74.07
GSMUA_Achr1P07960_001	Banana	plasma membrane	71.55	74.05
EER95630	Sorghum	golgi, peroxisome, plasma membrane	73.52	73.94
TraesCS5A01G521500.1	Wheat	plasma membrane	73.24	73.65
PGSC0003DMT400058582	Potato	plasma membrane	70.42	71.43
Zm00001d048499_P001	Maize	plasma membrane	72.68	70.11
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	68.17	67.98
PGSC0003DMT400000002	Potato	plasma membrane	52.39	67.15
KRG88431	Soybean	plasma membrane	26.76	61.29
KRH65174	Soybean	plasma membrane	37.75	43.51
KRH65169	Soybean	plasma membrane	37.46	43.32
Bra026835.1-P	Field mustard	plasma membrane	20.28	21.75
Bra019657.1-P	Field mustard	plasma membrane	20.28	21.75
Bra002536.1-P	Field mustard	plasma membrane	20.56	21.28
Bra006695.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.15	21.12
Bra026579.1-P	Field mustard	peroxisome	19.72	19.34

Protein Annotations

EnsemblPlants:Bra013669.1	EnsemblPlants:Bra013669.1-P	EnsemblPlantsGene:Bra013669	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF19
PFAM:PF08449	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002545AEE	UniProt:M4DB09	MapMan:24.2.1.1.5

Description

AT4G23010 (E=3e-175) ATUTR2, UTR2 | UDP-galactose transporter-related

Coordinates

chrA01:-:6986160..6990914

Molecular Weight (calculated)

39610.3 Da

IEP (calculated)

9.594

GRAVY (calculated)

0.396

Length

355 amino acids

Sequence
(BLAST)

001: MKEEQSRTLF GISLSDRPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI LMISGALIMD AFLGNLQEAI FTMNPETSQA
201: RKHKKKNGSM EMLFCSTVVG LPFLFVPMVL TGELFRAWTA CSQHPYVYGV LVFEAMATFI GQVSVLSLIA LFGAATTALI TTARKGVTLL LSYLIFTKPL
301: TEQHGSGLLL IAMGIVLKMV PMDSKPPSKI QARPAVRKDG GEGERGDEEE RKSLV

Best Arabidopsis Sequence Match ( AT4G23010.2 )
(BLAST)

001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQA
201: RKLKKTRLTL VMCVVQMEML FCSTVVGLPF LFVPMVLTGE VFRAWTACAQ HPYVYGVLVF EAMATFIGQV SVLSLIALFG AATTALITTA RKGVTLLLSY
301: LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV

Arabidopsis Description

UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.