CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
golgi 2
extracellular 1
plasma membrane 3
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013669.1-P	Field mustard	plasma membrane	77.49	94.08
CDY41258	Canola	plasma membrane	81.21	87.5
CDX94144	Canola	plasma membrane	71.93	86.11
AT4G23010.3	Thale cress	plasma membrane	73.09	80.36
HORVU4Hr1G085820.1	Barley	plasma membrane	60.56	76.99
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	62.18	76.79
CDY70445	Canola	cytosol, peroxisome, plasma membrane	62.18	76.57
KRH00671	Soybean	endoplasmic reticulum	63.57	76.54
Solyc08g080270.2.1	Tomato	plasma membrane	56.38	76.42
KRH40518	Soybean	plasma membrane	63.34	76.26
CDY58606	Canola	cytosol, peroxisome, plasma membrane	61.72	76.0
VIT_02s0025g04490.t01	Wine grape	plasma membrane	61.48	75.71
CDX98783	Canola	plasma membrane	65.66	75.47
VIT_15s0048g01060.t01	Wine grape	plasma membrane	60.79	75.29
TraesCS4B01G353800.1	Wheat	plasma membrane	60.79	74.64
TraesCS4D01G347700.1	Wheat	plasma membrane	60.09	74.43
TraesCS5A01G521500.1	Wheat	plasma membrane	60.79	74.22
GSMUA_Achr1P07960_001	Banana	plasma membrane	58.7	73.76
EER95630	Sorghum	golgi, peroxisome, plasma membrane	59.86	73.09
PGSC0003DMT400058582	Potato	plasma membrane	57.54	70.86
Zm00001d048499_P001	Maize	plasma membrane	59.4	69.57
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	55.92	67.7
PGSC0003DMT400000002	Potato	plasma membrane	42.92	66.79
KRG88431	Soybean	plasma membrane	22.04	61.29
KRH65174	Soybean	plasma membrane	30.86	43.18
KRH65169	Soybean	plasma membrane	30.63	43.0
CDY66447	Canola	peroxisome	15.31	22.07
CDY41674	Canola	plasma membrane	16.47	21.39
CDY49089	Canola	plasma membrane	16.24	21.15
CDY49577	Canola	plasma membrane	16.71	20.99
CDX80234	Canola	plasma membrane	16.71	20.99
CDY60561	Canola	cytosol, peroxisome, plasma membrane	16.71	20.99
CDY39320	Canola	plasma membrane	16.01	20.85
CDY33752	Canola	plasma membrane	16.01	20.85
CDX88721	Canola	cytosol, peroxisome, plasma membrane	17.87	20.05
CDX94506	Canola	extracellular	4.41	19.79
CDY09353	Canola	plasma membrane	16.47	19.45
CDX71077	Canola	cytosol	17.17	17.21

Protein Annotations

MapMan:24.2.1.1.5	GO:A0A078FD34	UniProt:A0A078FD34	EnsemblPlants:CDY10844	ProteinID:CDY10844	ProteinID:CDY10844.1
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00048721001	PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF19	TMHMM:TMhelix	InterPro:UAA
UniParc:UPI0004EEC44C	SEG:seg	:	:	:	:

Description

BnaC01g14590DBnaC01g14590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FD34]

Coordinates

chrLK032007:-:240362..242986

Molecular Weight (calculated)

48996.3 Da

IEP (calculated)

9.951

GRAVY (calculated)

0.486

Length

431 amino acids

Sequence
(BLAST)

001: MLLIIYLEVF TRVRFGFYFD SFCLLVIKKR RRRMKEEQSR TLFGISLSDR PTWQQFLICT SGFFFGYLVN GVCEEYVYNR LQFSFGWYFT FIQGFVYLFL
101: IYLQGFTTKH IVNPMRTYVK LSAVLMGSHG LTKGSLAYLN YPAQIMFKST KVLPVMIMVA FIPGLRRKYP VHEYISAFLL VLGLILFTLA DAQMSPNFSM
201: IGILMISGAL IMDAFLGNLQ EAIFTMNPET TQARKHKKNP MEMLFCSTVV GLPFLFVPMV LTGELFRAWT ACSQVSPNPM FCLTKTKLTH FSFWFIYHYE
301: IFLVHGLTGF SFGLMKMSKF VGFLHPYVYG VLVFEAMATF IGQVSVLSLI ALFGAATTAL ITTARKGVTL LLSYLIFTKP LTEQHGSGLL LIAMGIVLKM
401: VPMDSKPPSK VQARPAVRND GGDEEERKSL V

Best Arabidopsis Sequence Match ( AT4G23010.3 )
(BLAST)

001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV

Arabidopsis Description

UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.