Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 83.14 | 83.62 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 73.14 | 80.5 |
| Bra016764.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 80.29 | 80.29 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 80.29 | 80.29 |
| Bra019340.1-P | Field mustard | plasma membrane | 79.14 | 80.06 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 79.43 | 79.43 |
| AT1G12600.1 | Thale cress | plasma membrane | 79.14 | 79.37 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 77.43 | 77.65 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 75.14 | 77.58 |
| CDX94144 | Canola | plasma membrane | 79.14 | 76.94 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 76.86 | 76.2 |
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 75.71 | 75.5 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 75.43 | 75.43 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 74.86 | 75.29 |
| Bra013669.1-P | Field mustard | plasma membrane | 76.29 | 75.21 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 75.43 | 74.79 |
| Zm00001d048499_P001 | Maize | plasma membrane | 75.43 | 71.74 |
| AT4G23010.3 | Thale cress | plasma membrane | 77.43 | 69.13 |
| CDX98783 | Canola | plasma membrane | 73.43 | 68.53 |
| CDY41258 | Canola | plasma membrane | 76.57 | 67.0 |
| CDY10844 | Canola | plasma membrane | 75.71 | 61.48 |
| VIT_01s0026g01890.t01 | Wine grape | extracellular | 20.86 | 21.99 |
| VIT_06s0004g04070.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 20.57 | 20.93 |
Protein Annotations
| EntrezGene:100256411 | wikigene:100256411 | MapMan:24.2.1.1.5 | ProteinID:CBI34753 | ProteinID:CBI34753.3 | UniProt:D7TW78 |
| EMBL:FN596251 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030173 | GO:GO:0030176 | GO:GO:0046964 | GO:GO:0055085 | GO:GO:1902559 |
| EntrezGene:LOC100256411 | wikigene:LOC100256411 | PFAM:PF08449 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF29 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | InterPro:UAA | UniParc:UPI00015CD345 | ArrayExpress:VIT_02s0025g04490 | EnsemblPlantsGene:VIT_02s0025g04490 | EnsemblPlants:VIT_02s0025g04490.t01 |
| unigene:Vvi.23100 | RefSeq:XP_002282676 | RefSeq:XP_002282676.1 | : | : | : |
Description
No Description!
Coordinates
chr2:+:3979699..3982866
Molecular Weight (calculated)
38957.4 Da
IEP (calculated)
9.333
GRAVY (calculated)
0.400
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGEEQARSL FGISLSDRPK WQQFLICSSG FFFGYLINGI CEEYVYNRLK FSYGWYFTFI QGFVYLALIY LQGFTTKQMS NPWKTYVKLS AVLMGSHGLT
101: KGSLAFLNYP AQLMFKSTKV LPVMIMGAFI PGLRRKYPFH EYVSAVLLVV GLILFTLADA QTSPNFSSIG VLMISGALVM DSFLGNLQEA IFTMNPETTQ
201: MEMLFCSTVV GFPFLLVPMI LTGELFKAWN SCLQHPYVYG VLVFEAMATF VGQVSVLSLI AMFGAATTAM ITTARKAVTL LLSYMIFTKP LTEQHGTGLL
301: LIAMGIILKM LPDTQAPKRP TSSTAKPSSK GERALVEKMR DEGEEKQPLV
101: KGSLAFLNYP AQLMFKSTKV LPVMIMGAFI PGLRRKYPFH EYVSAVLLVV GLILFTLADA QTSPNFSSIG VLMISGALVM DSFLGNLQEA IFTMNPETTQ
201: MEMLFCSTVV GFPFLLVPMI LTGELFKAWN SCLQHPYVYG VLVFEAMATF VGQVSVLSLI AMFGAATTAM ITTARKAVTL LLSYMIFTKP LTEQHGTGLL
301: LIAMGIILKM LPDTQAPKRP TSSTAKPSSK GERALVEKMR DEGEEKQPLV
001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV
Arabidopsis Description
UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.