Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- peroxisome 1
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66447 | Canola | peroxisome | 67.73 | 77.93 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 77.03 | 77.26 |
| CDX80234 | Canola | plasma membrane | 76.74 | 76.97 |
| Bra002536.1-P | Field mustard | plasma membrane | 76.45 | 76.68 |
| PGSC0003DMT400040212 | Potato | plasma membrane | 73.84 | 76.51 |
| AT5G59740.1 | Thale cress | plasma membrane | 76.45 | 76.45 |
| Bra006695.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.51 | 76.4 |
| AT3G46180.1 | Thale cress | peroxisome, plasma membrane, vacuole | 77.03 | 76.37 |
| KRH23010 | Soybean | cytosol, peroxisome, plasma membrane | 77.62 | 75.85 |
| CDY49577 | Canola | plasma membrane | 75.58 | 75.8 |
| KRH24858 | Soybean | plasma membrane | 77.62 | 75.64 |
| KRH29862 | Soybean | cytosol | 29.65 | 75.0 |
| KRH10309 | Soybean | plasma membrane | 76.45 | 74.93 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 65.7 | 74.83 |
| PGSC0003DMT400028218 | Potato | peroxisome, plasma membrane, vacuole | 51.45 | 73.75 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 72.97 | 72.54 |
| KRH29863 | Soybean | extracellular, mitochondrion, plasma membrane | 45.93 | 72.48 |
| GSMUA_Achr6P33190_001 | Banana | extracellular | 29.94 | 72.03 |
| Zm00001d035601_P001 | Maize | plasma membrane | 70.93 | 69.91 |
| HORVU1Hr1G008350.2 | Barley | plasma membrane | 70.64 | 69.43 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 77.03 | 69.01 |
| TraesCS1A01G044800.1 | Wheat | plasma membrane | 69.77 | 68.57 |
| TraesCS1D01G045400.1 | Wheat | plasma membrane | 69.48 | 68.29 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 68.6 | 67.43 |
| Os05t0115700-01 | Rice | endoplasmic reticulum, plastid, vacuole | 70.35 | 67.22 |
| EES17597 | Sorghum | peroxisome, plasma membrane, vacuole | 70.06 | 67.13 |
| Zm00001d011038_P002 | Maize | plasma membrane | 70.06 | 67.13 |
| CDX71077 | Canola | cytosol | 77.03 | 61.63 |
| VIT_01s0026g01890.t01 | Wine grape | extracellular | 29.36 | 30.42 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 20.93 | 20.57 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 20.06 | 19.83 |
Protein Annotations
| EntrezGene:100262222 | wikigene:100262222 | MapMan:24.2.1.1.5 | ProteinID:CBI16197 | ProteinID:CBI16197.3 | UniProt:D7SKL9 |
| EMBL:FN594951 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030173 | GO:GO:0030176 | GO:GO:0046964 | GO:GO:0055085 | GO:GO:1902559 |
| EntrezGene:LOC100262222 | wikigene:LOC100262222 | PFAM:PF08449 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF13 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | InterPro:UAA | UniParc:UPI00015C78B4 | ArrayExpress:VIT_06s0004g04070 | EnsemblPlantsGene:VIT_06s0004g04070 | EnsemblPlants:VIT_06s0004g04070.t01 |
| RefSeq:XP_002281454 | RefSeq:XP_002281454.1 | RefSeq:XP_019076055.1 | RefSeq:XP_019076056.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr6:-:5040488..5055124
Molecular Weight (calculated)
38614.6 Da
IEP (calculated)
9.117
GRAVY (calculated)
0.381
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAAAPAVQ KENRFWKGVL AVVGIMTTLV IYGVLQEKIM RVPYGADKEY FKYSLFLVFC NRITTSAVSA GALLASKKAL DPVAPVYKYC LISVSNILTT
101: TCQYEALKYV SFPVQTLAKC AKMIPVMVWG TLIMQKRYRG PDYLLAFLVT VGCSFFILYP VASDISPYSK GRENTVWGVS LMMGYLGFDG FTSTFQDKLF
201: RGYNMEIHNQ IFYTTLCSCI LSLAGLIFQG HLPLAIDFVR RHNDCFFDIV LLSTVATASQ FFISYTIRTF GALTFATIMT TRQLVSIMLS CVWFSHPLSW
301: QQWIGAIIVF GSLYAKSFLK SMPQKPSPSE EREIEASKPL KESP
101: TCQYEALKYV SFPVQTLAKC AKMIPVMVWG TLIMQKRYRG PDYLLAFLVT VGCSFFILYP VASDISPYSK GRENTVWGVS LMMGYLGFDG FTSTFQDKLF
201: RGYNMEIHNQ IFYTTLCSCI LSLAGLIFQG HLPLAIDFVR RHNDCFFDIV LLSTVATASQ FFISYTIRTF GALTFATIMT TRQLVSIMLS CVWFSHPLSW
301: QQWIGAIIVF GSLYAKSFLK SMPQKPSPSE EREIEASKPL KESP
001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
Arabidopsis Description
UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.