Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G59740.1 | Thale cress | plasma membrane | 83.86 | 84.59 |
| VIT_06s0004g04070.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 76.37 | 77.03 |
| KRH24858 | Soybean | plasma membrane | 76.95 | 75.64 |
| PGSC0003DMT400040212 | Potato | plasma membrane | 72.33 | 75.6 |
| KRH23010 | Soybean | cytosol, peroxisome, plasma membrane | 76.08 | 75.0 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 73.78 | 73.99 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 64.27 | 73.84 |
| KRH10309 | Soybean | plasma membrane | 74.64 | 73.79 |
| PGSC0003DMT400028218 | Potato | peroxisome, plasma membrane, vacuole | 50.72 | 73.33 |
| KRH29863 | Soybean | extracellular, mitochondrion, plasma membrane | 44.96 | 71.56 |
| KRH29862 | Soybean | cytosol | 27.95 | 71.32 |
| TraesCS1D01G045400.1 | Wheat | plasma membrane | 67.15 | 66.57 |
| TraesCS1A01G044800.1 | Wheat | plasma membrane | 67.15 | 66.57 |
| GSMUA_Achr6P33190_001 | Banana | extracellular | 27.38 | 66.43 |
| HORVU1Hr1G008350.2 | Barley | plasma membrane | 66.86 | 66.29 |
| Zm00001d035601_P001 | Maize | plasma membrane | 66.28 | 65.9 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 65.71 | 65.14 |
| Os05t0115700-01 | Rice | endoplasmic reticulum, plastid, vacuole | 67.15 | 64.72 |
| EES17597 | Sorghum | peroxisome, plasma membrane, vacuole | 66.28 | 64.07 |
| Zm00001d011038_P002 | Maize | plasma membrane | 65.42 | 63.23 |
| AT1G14360.1 | Thale cress | plasma membrane | 27.67 | 29.0 |
| AT2G02810.1 | Thale cress | plasma membrane | 27.67 | 28.92 |
| AT1G12600.1 | Thale cress | plasma membrane | 21.04 | 20.92 |
| AT4G23010.3 | Thale cress | plasma membrane | 20.75 | 18.37 |
Protein Annotations
| MapMan:24.2.1.1.5 | EntrezGene:823761 | UniProt:A0A178V982 | ProteinID:AEE78125.1 | EMBL:AK227561 | EMBL:AK318892 |
| ArrayExpress:AT3G46180 | EnsemblPlantsGene:AT3G46180 | RefSeq:AT3G46180 | TAIR:AT3G46180 | RefSeq:AT3G46180-TAIR-G | EnsemblPlants:AT3G46180.1 |
| TAIR:AT3G46180.1 | EMBL:BT011224 | EMBL:BT012152 | ProteinID:CAB90945.1 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0030173 | GO:GO:0030176 | GO:GO:0046964 | GO:GO:0055085 | GO:GO:1902559 | RefSeq:NP_190204.2 |
| ProteinID:OAP02281.1 | PFAM:PF08449 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF13 | UniProt:Q6NM25 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | InterPro:UAA | UniParc:UPI0000233938 | Symbol:UTR5 | SEG:seg |
Description
UTR5UTR5 [Source:UniProtKB/TrEMBL;Acc:A0A178V982]
Coordinates
chr3:-:16954024..16956885
Molecular Weight (calculated)
38862.0 Da
IEP (calculated)
9.358
GRAVY (calculated)
0.315
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEPDSVNEA KEKKKKLWKA VFAISGIMLT LVIYGLLQEK IMRVPYGLKK EYFKHSLFLV FCNRLTTSAV SAAALLASKK VLDPVAPVYK YCLISVTNIL
101: TTTCQYEALK YVSFPVQTLA KCAKMIPVMV WGTLIMQKKY RGFDYLVAFL VTLGCSVFIL FPAGDDISPY NKGRENTVWG VSLMVGYLGF DGFTSTFQDK
201: LFKGYNMEIH NQIFYTTICS SILSFTGLIL QGHLLPAVDF VSRHRDCLFD IALLSTVATA SQFFISYTIR TFGALTFAAI MTTRQLASIM LSCIWFSHPL
301: SWEQCIGSVI VFGSLYAKTF VKKKSEKPPA AQELPRDEEA QPLKGNP
101: TTTCQYEALK YVSFPVQTLA KCAKMIPVMV WGTLIMQKKY RGFDYLVAFL VTLGCSVFIL FPAGDDISPY NKGRENTVWG VSLMVGYLGF DGFTSTFQDK
201: LFKGYNMEIH NQIFYTTICS SILSFTGLIL QGHLLPAVDF VSRHRDCLFD IALLSTVATA SQFFISYTIR TFGALTFAAI MTTRQLASIM LSCIWFSHPL
301: SWEQCIGSVI VFGSLYAKTF VKKKSEKPPA AQELPRDEEA QPLKGNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.