Factsheet for GSMUA_Achr6P33190_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
plastid 1
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29862	Soybean	cytosol	65.73	69.12
PGSC0003DMT400028218	Potato	peroxisome, plasma membrane, vacuole	68.53	40.83
CDY66447	Canola	peroxisome	67.83	32.44
Bra006695.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.83	30.12
VIT_06s0004g04070.t01	Wine grape	peroxisome, plasma membrane, vacuole	72.03	29.94
PGSC0003DMT400040212	Potato	plasma membrane	69.23	29.82
Zm00001d035601_P001	Maize	plasma membrane	69.23	28.37
Solyc06g005290.2.1	Tomato	peroxisome	68.53	28.32
CDY60561	Canola	cytosol, peroxisome, plasma membrane	67.83	28.28
AT5G59740.1	Thale cress	plasma membrane	67.83	28.2
KRH23010	Soybean	cytosol, peroxisome, plasma membrane	69.23	28.12
TraesCS1A01G044800.1	Wheat	plasma membrane	68.53	28.0
KRH24858	Soybean	plasma membrane	68.53	27.76
TraesCS1D01G045400.1	Wheat	plasma membrane	67.83	27.71
HORVU1Hr1G008350.2	Barley	plasma membrane	67.83	27.71
Bra002536.1-P	Field mustard	plasma membrane	66.43	27.7
CDX80234	Canola	plasma membrane	66.43	27.7
CDY49577	Canola	plasma membrane	66.43	27.7
EES17597	Sorghum	peroxisome, plasma membrane, vacuole	69.23	27.58
Os05t0115700-01	Rice	endoplasmic reticulum, plastid, vacuole	69.23	27.5
TraesCS1B01G058000.1	Wheat	plasma membrane	67.13	27.43
AT3G46180.1	Thale cress	peroxisome, plasma membrane, vacuole	66.43	27.38
KRH10309	Soybean	plasma membrane	67.13	27.35
Zm00001d011038_P002	Maize	plasma membrane	68.53	27.3
GSMUA_Achr10P...	Banana	extracellular	25.17	25.9
CDX88721	Canola	cytosol, peroxisome, plasma membrane	68.53	25.52
CDX71077	Canola	cytosol	69.23	23.02
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	46.15	21.85
GSMUA_AchrUn_...	Banana	plasma membrane	30.77	12.46
GSMUA_Achr1P07960_001	Banana	plasma membrane	18.88	7.87
CDX94506	Canola	extracellular	2.1	3.12
KRH29863	Soybean	extracellular, mitochondrion, plasma membrane	2.1	1.38

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33190_001	EnsemblPlants:GSMUA_Achr6T33190_001	EnsemblPlantsGene:GSMUA_Achr6G33190_001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF13
PFAM:PF08449	TMHMM:TMhelix	UniParc:UPI0002948975	UniProt:M0TCB2	MapMan:24.2.1.1.5	:

Description

transporter family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G33190_001]

Coordinates

chr6:+:32319957..32321816

Molecular Weight (calculated)

15846.9 Da

IEP (calculated)

9.372

GRAVY (calculated)

0.470

Length

143 amino acids

Sequence
(BLAST)

001: MAEPLSASMK GKENRVLQCA FAVTGIMSTL LVYGILQEKI MRVPYGINKE YFRYSLFLVF CNRIMTSAVS AGVLLASKKS LDPVAPIYKY CAISVSNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVS LYQIGKYGSC TCF

Best Arabidopsis Sequence Match ( AT5G59740.1 )
(BLAST)

001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS

Arabidopsis Description

UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.