Factsheet for GSMUA_Achr10P21090_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P12060_001
GSMUA_Achr1P20280_001
GSMUA_Achr2P22980_001
GSMUA_Achr3P04120_001
GSMUA_Achr4P01630_001
GSMUA_Achr5P20880_001
GSMUA_Achr6P08980_001
GSMUA_Achr8P11120_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr11P...	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr1P20280_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr5P20880_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr8P11120_001	AT3G60600.1	21798944
AT1G14360.1	GSMUA_Achr10P...	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr3P04120_001	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr4P01630_001	AT4G26455.1	21798944
AT1G14360.1	GSMUA_Achr1P12060_001	AT5G66480.1	21798944
AT1G14360.1	GSMUA_Achr2P22980_001	AT5G66480.1	21798944
AT1G14360.1	GSMUA_Achr6P08980_001	AT5G66480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	71.94	28.33
VIT_01s0026g01890.t01	Wine grape	extracellular	62.59	26.2
Bra019657.1-P	Field mustard	plasma membrane	61.87	25.98
CDY49089	Canola	plasma membrane	61.87	25.98
CDY39320	Canola	plasma membrane	61.87	25.98
KRH74812	Soybean	plasma membrane	61.15	25.76
CDY33752	Canola	plasma membrane	61.15	25.68
Bra026835.1-P	Field mustard	plasma membrane	61.15	25.68
AT2G02810.1	Thale cress	plasma membrane	61.15	25.6
AT1G14360.1	Thale cress	plasma membrane	60.43	25.38
PGSC0003DMT400065812	Potato	plasma membrane	60.43	25.3
Solyc05g007150.2.1	Tomato	plasma membrane	63.31	25.21
GSMUA_Achr6P33190_001	Banana	extracellular	25.9	25.17
CDY41674	Canola	plasma membrane	59.71	25.0
Solyc01g010650.2.1	Tomato	plasma membrane	59.71	24.92
KRH69315	Soybean	plasma membrane	58.99	24.85
CDY09353	Canola	plasma membrane	59.71	22.74
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	58.99	22.71
EER88586	Sorghum	mitochondrion	58.27	22.38
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	56.83	22.07
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	56.12	21.85
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	56.12	21.85
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	56.12	21.79
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	56.12	21.67
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	56.12	20.8
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	48.2	19.71
Bra026579.1-P	Field mustard	peroxisome	43.88	16.85
PGSC0003DMT400000700	Potato	endoplasmic reticulum	6.47	11.54
PGSC0003DMT400002255	Potato	plastid	14.39	8.47
GSMUA_Achr1P07960_001	Banana	plasma membrane	13.67	5.54
KRG99133	Soybean	extracellular	2.16	2.36

Protein Annotations

EnsemblPlants:GSMUA_Achr10P21090_001	EnsemblPlants:GSMUA_Achr10T21090_001	EnsemblPlantsGene:GSMUA_Achr10G21090_001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF10
PFAM:PF08449	TMHMM:TMhelix	UniParc:UPI00029660D6	UniProt:M0RK34	MapMan:24.2.1.1.5	:

Description

UDP-galactose transporter, putative [Source:GMGC_GENE;Acc:GSMUA_Achr10G21090_001]

Coordinates

chr10:+:26864160..26865229

Molecular Weight (calculated)

15232.4 Da

IEP (calculated)

7.241

GRAVY (calculated)

0.342

Length

139 amino acids

Sequence
(BLAST)

001: MEGHEAAAAF DRVLLLAFCV VGIWSAYIYQ GVLQETASTK LFGPDGKRFE HLSFLNLAQN AVCFLWSLII AIKLWSRNSS GVAPLWSYWS PNISNTIGPS
101: MGIEALKYIS YPAQYCSNSD QTSKGIVAIC KACISSILD

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.