Factsheet for Solyc01g010650.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
golgi 6
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g085000.2.1
Solyc05g015640.2.1
Solyc06g074170.2.1
Solyc07g066170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	Solyc05g015640.2.1	AT1G27300.1	21798944
AT1G14360.1	Solyc07g066170.2.1	AT4G26455.1	21798944
AT1G14360.1	Solyc02g085000.2.1	AT5G66480.1	21798944
AT2G02810.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT2G02810.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002255	Potato	plastid	70.27	99.15
KRH74812	Soybean	plasma membrane	87.69	88.48
KRH69315	Soybean	plasma membrane	87.09	87.88
Bra026835.1-P	Field mustard	plasma membrane	86.79	87.31
CDY33752	Canola	plasma membrane	86.79	87.31
AT1G14360.1	Thale cress	plasma membrane	85.89	86.4
Bra019657.1-P	Field mustard	plasma membrane	85.29	85.8
CDY39320	Canola	plasma membrane	85.29	85.8
CDY49089	Canola	plasma membrane	85.29	85.8
Solyc05g007150.2.1	Tomato	plasma membrane	89.49	85.39
VIT_01s0026g01890.t01	Wine grape	extracellular	83.18	83.43
CDY41674	Canola	plasma membrane	81.38	81.63
AT2G02810.1	Thale cress	plasma membrane	80.18	80.42
GSMUA_AchrUn_...	Banana	plasma membrane	81.68	77.05
CDY09353	Canola	plasma membrane	81.38	74.25
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	74.47	69.27
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	73.87	68.91
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	73.87	68.72
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	73.57	68.63
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	73.87	68.14
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	73.57	68.06
Bra026579.1-P	Field mustard	peroxisome	73.87	67.96
EER88586	Sorghum	mitochondrion	73.57	67.68
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	70.27	62.4
GSMUA_Achr10P...	Banana	extracellular	24.92	59.71
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	57.66	56.47
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	26.43	29.14
Solyc06g005290.2.1	Tomato	peroxisome	27.63	26.59
Solyc08g080270.2.1	Tomato	plasma membrane	20.42	21.38
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	21.02	19.66

Protein Annotations

MapMan:24.2.1.1.5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005459	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0030173	GO:GO:0030176	GO:GO:0055085	GO:GO:0072334
UniProt:K4ATQ8	PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF10	EnsemblPlantsGene:Solyc01g010650.2	EnsemblPlants:Solyc01g010650.2.1
TMHMM:TMhelix	InterPro:UAA	UniParc:UPI0002761CF5	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:5655290..5660901

Molecular Weight (calculated)

37093.7 Da

IEP (calculated)

10.178

GRAVY (calculated)

0.273

Length

333 amino acids

Sequence
(BLAST)

001: MESHGAGIRR VMVLAFCVAG IWSAYIYQGV LQETVSTKRF GPNKERFEHL AFLNLAQNVV CLIWSFMMIK IWSSGNSGGA PWWSYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGAIVY GIRYTVPEYV CTLLVAGGVS MFALLKTSSK TISKLAHPNA PVGYGLCFLN LTFDGFTNAT QDSIKARYPK
201: TSAWDIMLGM NLWGTIYNMI FMFGWSNASG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LTNTTITTTR KFVSIVVSSV LSGNPLSTKQ
301: WTSVIMVFSG LSFQIYLKWR KLQRMPKKKK KSN

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.