Factsheet for TraesCS7A01G370000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi

Predictor Summary:

golgi 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G331000.1
TraesCS2A01G346700.1
TraesCS2A01G368500.1
TraesCS2B01G351300.1
TraesCS2B01G365000.1
TraesCS2B01G385700.2
TraesCS2D01G332000.1
TraesCS2D01G345400.1
TraesCS2D01G365300.2
TraesCS4A01G499900.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS6A01G237600.1
TraesCS6A01G272000.1
TraesCS6B01G266100.1
TraesCS6B01G299600.1
TraesCS6D01G220300.1
TraesCS6D01G252200.1
TraesCS7A01G000300.1
TraesCS7A01G240200.1
TraesCS7A01G300700.1
TraesCS7B01G135800.1
TraesCS7D01G000200.1
TraesCS7D01G238200.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	TraesCS4A01G499900.1	AT1G01010.1	21798944
AT1G14360.1	TraesCS7A01G000300.1	AT1G01010.1	21798944
AT1G14360.1	TraesCS7D01G000200.1	AT1G01010.1	21798944
AT1G14360.1	TraesCS2A01G346700.1	AT1G27300.1	21798944
AT1G14360.1	TraesCS2B01G365000.1	AT1G27300.1	21798944
AT1G14360.1	TraesCS2D01G345400.1	AT1G27300.1	21798944
AT1G14360.1	TraesCS2A01G368500.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS2B01G385700.2	AT3G60600.1	21798944
AT1G14360.1	TraesCS2D01G365300.2	AT3G60600.1	21798944
AT1G14360.1	TraesCS6A01G237600.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS6B01G266100.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS6D01G220300.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS7A01G300700.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS7D01G296400.1	AT3G60600.1	21798944
AT1G14360.1	TraesCS2A01G331000.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS2B01G351300.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS2D01G332000.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS5A01G257000.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS5B01G256500.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS5D01G265600.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS7A01G240200.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS7B01G135800.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS7D01G238200.1	AT4G26455.1	21798944
AT1G14360.1	TraesCS6A01G272000.1	AT5G66480.1	21798944
AT1G14360.1	TraesCS6B01G299600.1	AT5G66480.1	21798944
AT1G14360.1	TraesCS6D01G252200.1	AT5G66480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	96.11	96.65
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	91.67	92.44
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	91.11	91.88
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	86.94	87.43
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	85.28	85.04
EER88586	Sorghum	mitochondrion	84.72	84.25
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	80.0	76.8
PGSC0003DMT400002255	Potato	plastid	49.72	75.85
CDY33752	Canola	plasma membrane	68.61	74.62
Bra026835.1-P	Field mustard	plasma membrane	68.61	74.62
CDY49089	Canola	plasma membrane	68.61	74.62
Bra019657.1-P	Field mustard	plasma membrane	68.61	74.62
VIT_01s0026g01890.t01	Wine grape	extracellular	68.61	74.4
KRH74812	Soybean	plasma membrane	67.78	73.94
AT1G14360.1	Thale cress	plasma membrane	67.78	73.72
Solyc01g010650.2.1	Tomato	plasma membrane	68.06	73.57
PGSC0003DMT400065812	Potato	plasma membrane	67.78	73.49
KRH69315	Soybean	plasma membrane	67.22	73.33
CDY39320	Canola	plasma membrane	67.22	73.11
CDY41674	Canola	plasma membrane	66.67	72.29
GSMUA_AchrUn_...	Banana	plasma membrane	70.28	71.67
AT2G02810.1	Thale cress	plasma membrane	65.0	70.48
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	66.39	70.29
Solyc05g007150.2.1	Tomato	plasma membrane	67.5	69.63
CDY09353	Canola	plasma membrane	66.67	65.75
Bra026579.1-P	Field mustard	peroxisome	61.67	61.33
GSMUA_Achr10P...	Banana	extracellular	21.67	56.12
KRG99133	Soybean	extracellular	19.72	55.91
TraesCS1A01G044800.1	Wheat	plasma membrane	27.78	28.57
TraesCS5A01G521500.1	Wheat	plasma membrane	17.78	18.13
PGSC0003DMT400000700	Potato	endoplasmic reticulum	3.61	16.67

Protein Annotations

EnsemblPlants:TraesCS7A01G370000.1	EnsemblPlantsGene:TraesCS7A01G370000	GO:GO:0006810	GO:GO:0008150	GO:GO:0055085	InterPro:UAA
PANTHER:PTHR10778	PANTHER:PTHR10778:SF10	PFAM:PF08449	SEG:seg	TMHMM:TMhelix	MapMan:24.2.1.1.5

Description

No Description!

Coordinates

chr7A:+:543425044..543428309

Molecular Weight (calculated)

39544.5 Da

IEP (calculated)

10.158

GRAVY (calculated)

0.227

Length

360 amino acids

Sequence
(BLAST)

001: MVSARKGQGR GGGARGPPRV DGGGGGGSLA SRVAVLAFCV AGIWSSYITQ GILQETLSTK RFGPEERRFD HLAFLNFAQN VVCFVWSFIM IKLWSGGSSP
101: AGRAPLLKYW GVSITNTIGP TMGIEALKYI SYPAQVLAKS SKMIPVMLMG TLLYGVKYTI PEYFCTFLVA GGVSSFALLK TSSKTIKKLA NPNAPLGYGL
201: CFLNLAFDGY TNSTQDLIKS RFPKTNPWDI MLGMNLWGTI YNTLIMFVAP LLFSNWPYAN GFEAVSFCRE NPEVAWDILM FCLCGAVGQN FIFLTISRFG
301: SLTNTTITTT RKFMSIVISS VISGNPLSME QWGSVVMVFS GLSLQIYLKW KRKKGRDHKE

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.