Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G045400.1 | Wheat | plasma membrane | 97.71 | 97.71 |
| HORVU1Hr1G008350.2 | Barley | plasma membrane | 92.57 | 92.57 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 89.14 | 89.14 |
| Zm00001d035601_P001 | Maize | plasma membrane | 79.43 | 79.66 |
| Zm00001d011038_P002 | Maize | plasma membrane | 80.0 | 77.99 |
| Os05t0115700-01 | Rice | endoplasmic reticulum, plastid, vacuole | 80.0 | 77.78 |
| EES17597 | Sorghum | peroxisome, plasma membrane, vacuole | 79.71 | 77.72 |
| PGSC0003DMT400040212 | Potato | plasma membrane | 69.71 | 73.49 |
| CDY66447 | Canola | peroxisome | 60.57 | 70.9 |
| PGSC0003DMT400028218 | Potato | peroxisome, plasma membrane, vacuole | 48.0 | 70.0 |
| AT5G59740.1 | Thale cress | plasma membrane | 68.57 | 69.77 |
| VIT_06s0004g04070.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 68.57 | 69.77 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 60.0 | 69.54 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 67.71 | 69.1 |
| Bra006695.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 63.14 | 68.63 |
| GSMUA_Achr6P33190_001 | Banana | extracellular | 28.0 | 68.53 |
| CDY49577 | Canola | plasma membrane | 67.14 | 68.51 |
| CDX80234 | Canola | plasma membrane | 67.14 | 68.51 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 67.71 | 68.5 |
| KRH29863 | Soybean | extracellular, mitochondrion, plasma membrane | 42.57 | 68.35 |
| Bra002536.1-P | Field mustard | plasma membrane | 66.86 | 68.22 |
| KRH24858 | Soybean | plasma membrane | 68.29 | 67.71 |
| AT3G46180.1 | Thale cress | peroxisome, plasma membrane, vacuole | 66.57 | 67.15 |
| KRH23010 | Soybean | cytosol, peroxisome, plasma membrane | 66.29 | 65.91 |
| KRH10309 | Soybean | plasma membrane | 66.0 | 65.81 |
| KRH29862 | Soybean | cytosol | 25.43 | 65.44 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 67.43 | 61.46 |
| CDX71077 | Canola | cytosol | 67.14 | 54.65 |
| TraesCS7A01G370000.1 | Wheat | golgi, mitochondrion, plasma membrane | 28.57 | 27.78 |
| CDX94506 | Canola | extracellular | 6.29 | 22.92 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 20.57 | 20.4 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G044800.1 | EnsemblPlantsGene:TraesCS1A01G044800 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0055085 | InterPro:UAA |
| PANTHER:PTHR10778 | PANTHER:PTHR10778:SF13 | PFAM:PF08449 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix |
| MapMan:24.2.1.1.5 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:25701601..25708566
Molecular Weight (calculated)
39023.3 Da
IEP (calculated)
9.288
GRAVY (calculated)
0.418
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MADEPALPVA AGRDKDERRR LMGRCALAVV GIMSTLLVYG VLQEKLMRVP YGAEKEFFRY SLFLVFCNRI TTSMVSALVL LSSKKSTDPV APIQKYCIIS
101: FSNILTTTCQ YEALKYVSFP VQTLAKCAKM IPVMIWGTII MKKKYGGKDY FFAVIVTMGC SLFILYPASM DVSPLNKGRE STVWGVSLML GYLGFDGFTS
201: TFQDKLFKGY EMEIHNQIFY TTMCSCVISL SGLILQNHLL PAVDFMVRHP DCFYDVLILS TVATASQFFI SYTIRTFGAL TFATIMTTRQ LVSILLSCVW
301: FVHPLSWMQW VGAAIVFGAL YAKTFTRNKT QKAMVASSSP QGSVPNAANS
101: FSNILTTTCQ YEALKYVSFP VQTLAKCAKM IPVMIWGTII MKKKYGGKDY FFAVIVTMGC SLFILYPASM DVSPLNKGRE STVWGVSLML GYLGFDGFTS
201: TFQDKLFKGY EMEIHNQIFY TTMCSCVISL SGLILQNHLL PAVDFMVRHP DCFYDVLILS TVATASQFFI SYTIRTFGAL TFATIMTTRQ LVSILLSCVW
301: FVHPLSWMQW VGAAIVFGAL YAKTFTRNKT QKAMVASSSP QGSVPNAANS
001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
Arabidopsis Description
UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.