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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66447 Canola peroxisome 77.62 89.3
CDY60561 Canola cytosol, peroxisome, plasma membrane 88.66 88.92
CDX80234 Canola plasma membrane 88.08 88.34
Bra002536.1-P Field mustard plasma membrane 87.21 87.46
Bra006695.1-P Field mustard cytosol, peroxisome, plasma membrane 81.69 87.27
CDY49577 Canola plasma membrane 86.34 86.59
AT3G46180.1 Thale cress peroxisome, plasma membrane, vacuole 84.59 83.86
CDX88721 Canola cytosol, peroxisome, plasma membrane 88.95 79.69
PGSC0003DMT400040212 Potato plasma membrane 75.58 78.31
PGSC0003DMT400028218 Potato peroxisome, plasma membrane, vacuole 53.49 76.67
VIT_06s0004g04070.t01 Wine grape peroxisome, plasma membrane, vacuole 76.45 76.45
Solyc11g073190.1.1 Tomato peroxisome, plasma membrane, vacuole 66.57 75.83
KRH29862 Soybean cytosol 29.36 74.26
Solyc06g005290.2.1 Tomato peroxisome 74.13 73.7
KRH24858 Soybean plasma membrane 75.29 73.37
KRH23010 Soybean cytosol, peroxisome, plasma membrane 75.0 73.3
KRH10309 Soybean plasma membrane 74.71 73.22
CDX71077 Canola cytosol 88.66 70.93
KRH29863 Soybean extracellular, mitochondrion, plasma membrane 44.19 69.72
TraesCS1A01G044800.1 Wheat plasma membrane 69.77 68.57
TraesCS1D01G045400.1 Wheat plasma membrane 69.77 68.57
HORVU1Hr1G008350.2 Barley plasma membrane 69.48 68.29
GSMUA_Achr6P33190_001 Banana extracellular 28.2 67.83
Zm00001d035601_P001 Maize plasma membrane 68.6 67.62
TraesCS1B01G058000.1 Wheat plasma membrane 68.31 67.14
EES17597 Sorghum peroxisome, plasma membrane, vacuole 68.9 66.02
Zm00001d011038_P002 Maize plasma membrane 68.02 65.18
Os05t0115700-01 Rice endoplasmic reticulum, plastid, vacuole 67.44 64.44
AT2G02810.1 Thale cress plasma membrane 28.49 29.52
AT1G14360.1 Thale cress plasma membrane 27.62 28.7
AT1G12600.1 Thale cress plasma membrane 21.8 21.49
AT4G23010.3 Thale cress plasma membrane 21.51 18.88
Protein Annotations
MapMan:24.2.1.1.5EntrezGene:836095UniProt:A0A178U9N4ProteinID:AED97226.1EMBL:AK175459EMBL:AK175461
ArrayExpress:AT5G59740EnsemblPlantsGene:AT5G59740RefSeq:AT5G59740TAIR:AT5G59740RefSeq:AT5G59740-TAIR-GEnsemblPlants:AT5G59740.1
TAIR:AT5G59740.1Unigene:At.29208ProteinID:BAB09511.1EMBL:BT011744GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005794
GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0030173GO:GO:0030176GO:GO:0046964GO:GO:0055085GO:GO:1902559RefSeq:NP_200782.1
ProteinID:OAO89842.1PFAM:PF08449PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR10778PANTHER:PTHR10778:SF13UniProt:Q6NMB6
SUPFAM:SSF103481TMHMM:TMhelixInterPro:UAAUniParc:UPI00001628CBSEG:seg:
Description
UTR5BUDP-galactose/UDP-glucose transporter 5B [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB6]
Coordinates
chr5:-:24070049..24073086
Molecular Weight (calculated)
38220.0 Da
IEP (calculated)
8.648
GRAVY (calculated)
0.381
Length
344 amino acids
Sequence
(BLAST)
001: MAEPELVNGG VKENKLWKGV FAVSGIMSTL VIYGVLQEKI MRVPYGVNKE FFKHSLFLVF CNRLTTSAVS AGALLASKKV LDPVAPVYKY CLISVTNILT
101: TTCQYEALKY VSFPVQTLAK CAKMIPVMVW GTLIMQKKYK GFDYLVAFLV TLGCSVFILF PAGDDVSPYN KGRENTVWGV SLMAGYLGFD GFTSTFQDKL
201: FKGYNMEIHN QIFYTTLCSC VLSFTGLILQ GHLLPAVDFV SLHRDCLLDI ALLSTVATAS QFFISYTIRT FGALTFAAIM TTRQLASIML SCIWFSHPLS
301: WEQCIGSVIV FGSLYAKNLL NNKKNSQTQP PPPELPQYEK VESS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.