Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, vacuole
Predictor Summary:
Predictor Summary:
- plastid 4
- extracellular 1
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17597 | Sorghum | peroxisome, plasma membrane, vacuole | 82.5 | 82.73 |
| Zm00001d035601_P001 | Maize | plasma membrane | 79.72 | 82.23 |
| HORVU1Hr1G008350.2 | Barley | plasma membrane | 79.44 | 81.71 |
| TraesCS1B01G058000.1 | Wheat | plasma membrane | 78.89 | 81.14 |
| Zm00001d011038_P002 | Maize | plasma membrane | 80.83 | 81.06 |
| TraesCS1D01G045400.1 | Wheat | plasma membrane | 78.61 | 80.86 |
| TraesCS1A01G044800.1 | Wheat | plasma membrane | 77.78 | 80.0 |
| PGSC0003DMT400040212 | Potato | plasma membrane | 68.06 | 73.8 |
| PGSC0003DMT400028218 | Potato | peroxisome, plasma membrane, vacuole | 49.17 | 73.75 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 59.72 | 71.19 |
| VIT_06s0004g04070.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 67.22 | 70.35 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 67.22 | 69.94 |
| CDY66447 | Canola | peroxisome | 58.06 | 69.9 |
| KRH24858 | Soybean | plasma membrane | 68.06 | 69.41 |
| GSMUA_Achr6P33190_001 | Banana | extracellular | 27.5 | 69.23 |
| Bra002536.1-P | Field mustard | plasma membrane | 65.56 | 68.8 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 65.28 | 68.51 |
| CDY49577 | Canola | plasma membrane | 65.28 | 68.51 |
| Bra006695.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 61.11 | 68.32 |
| CDX80234 | Canola | plasma membrane | 64.72 | 67.93 |
| AT5G59740.1 | Thale cress | plasma membrane | 64.44 | 67.44 |
| KRH23010 | Soybean | cytosol, peroxisome, plasma membrane | 65.83 | 67.33 |
| AT3G46180.1 | Thale cress | peroxisome, plasma membrane, vacuole | 64.72 | 67.15 |
| KRH10309 | Soybean | plasma membrane | 65.28 | 66.95 |
| KRH29862 | Soybean | cytosol | 25.28 | 66.91 |
| KRH29863 | Soybean | extracellular, mitochondrion, plasma membrane | 40.0 | 66.06 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 65.0 | 60.94 |
| CDX71077 | Canola | cytosol | 65.0 | 54.42 |
| Os06t0593100-01 | Rice | golgi, peroxisome, plasma membrane | 27.22 | 27.37 |
| CDX94506 | Canola | extracellular | 6.11 | 22.92 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 20.0 | 20.63 |
Protein Annotations
| MapMan:24.2.1.1.5 | EntrezGene:4337618 | ProteinID:AAU44083.1 | ProteinID:AAV44195.1 | EMBL:AK070819 | ProteinID:BAF16380.1 |
| ProteinID:BAS91965.1 | ProteinID:EEE62105.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030173 | GO:GO:0030176 | GO:GO:0046964 | GO:GO:0055085 |
| GO:GO:1902559 | EnsemblPlantsGene:Os05g0115700 | EnsemblPlants:Os05t0115700-01 | PFAM:PF08449 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF13 |
| UniProt:Q65XA4 | SUPFAM:SSF103481 | TMHMM:TMhelix | InterPro:UAA | UniParc:UPI000043F466 | RefSeq:XP_015639712.1 |
| SEG:seg | : | : | : | : | : |
Description
Similar to UDP-galactose transporter related protein-like. (Os05t0115700-01)
Coordinates
chr5:+:851777..858063
Molecular Weight (calculated)
39647.7 Da
IEP (calculated)
9.407
GRAVY (calculated)
0.412
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MADAASSSAS ASAAVAGTLP VAAAATGKDK EDRRRLVGRC GFAVVGIMST LLIYGLLQEK IMRVPYGAEK EFFRYSLFLV FCNRITTSTV SALVLTASKK
101: SLDPVAPLQK YCVVSVSNIL TTTCQYEALK YVSFPVQTLA KCAKMIPVMI WGTIIMRKKY GGKDYFFAVV VTVGCSLFIL YPASMDASPF NRGRENTIWG
201: VSLMLGYLGF DGFTSTFQDK LFKGYDMEIH NQIFYTTMCS CVLSLSGLIL QNQMIPAVDF MFRHPDCFYD VIILSSVATA SQFFISYTIR TFGALTFATI
301: MTTRQLVSIL LSCVWFVHPL SWMQWVGAAI VFGALYTKSF LRSKPQKPAA ANPSNSANNS
101: SLDPVAPLQK YCVVSVSNIL TTTCQYEALK YVSFPVQTLA KCAKMIPVMI WGTIIMRKKY GGKDYFFAVV VTVGCSLFIL YPASMDASPF NRGRENTIWG
201: VSLMLGYLGF DGFTSTFQDK LFKGYDMEIH NQIFYTTMCS CVLSLSGLIL QNQMIPAVDF MFRHPDCFYD VIILSSVATA SQFFISYTIR TFGALTFATI
301: MTTRQLVSIL LSCVWFVHPL SWMQWVGAAI VFGALYTKSF LRSKPQKPAA ANPSNSANNS
001: MAEPDSVNEA KEKKKKLWKA VFAISGIMLT LVIYGLLQEK IMRVPYGLKK EYFKHSLFLV FCNRLTTSAV SAAALLASKK VLDPVAPVYK YCLISVTNIL
101: TTTCQYEALK YVSFPVQTLA KCAKMIPVMV WGTLIMQKKY RGFDYLVAFL VTLGCSVFIL FPAGDDISPY NKGRENTVWG VSLMVGYLGF DGFTSTFQDK
201: LFKGYNMEIH NQIFYTTICS SILSFTGLIL QGHLLPAVDF VSRHRDCLFD IALLSTVATA SQFFISYTIR TFGALTFAAI MTTRQLASIM LSCIWFSHPL
301: SWEQCIGSVI VFGSLYAKTF VKKKSEKPPA AQELPRDEEA QPLKGNP
101: TTTCQYEALK YVSFPVQTLA KCAKMIPVMV WGTLIMQKKY RGFDYLVAFL VTLGCSVFIL FPAGDDISPY NKGRENTVWG VSLMVGYLGF DGFTSTFQDK
201: LFKGYNMEIH NQIFYTTICS SILSFTGLIL QGHLLPAVDF VSRHRDCLFD IALLSTVATA SQFFISYTIR TFGALTFAAI MTTRQLASIM LSCIWFSHPL
301: SWEQCIGSVI VFGSLYAKTF VKKKSEKPPA AQELPRDEEA QPLKGNP
Arabidopsis Description
UTR5UTR5 [Source:UniProtKB/TrEMBL;Acc:A0A178V982]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.