CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER87676
EER96942
EES05123
EES12559
EES14314
EES14570
KXG31128
OQU78405
OQU81760
OQU85551

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	EER87676	AT1G01010.1	21798944
AT1G14360.1	EES05123	AT1G27300.1	21798944
AT1G14360.1	EES12559	AT3G60600.1	21798944
AT1G14360.1	EES14570	AT3G60600.1	21798944
AT1G14360.1	KXG31128	AT3G60600.1	21798944
AT1G14360.1	EER96942	AT4G26455.1	21798944
AT1G14360.1	EES14314	AT4G26455.1	21798944
AT1G14360.1	OQU81760	AT4G26455.1	21798944
AT1G14360.1	OQU78405	AT5G66480.1	21798944
AT1G14360.1	OQU85551	AT5G66480.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	90.06	90.3
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	84.81	85.75
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	84.53	85.47
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	83.98	85.15
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	83.7	84.87
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	84.25	84.72
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	82.04	79.2
KRH74812	Soybean	plasma membrane	69.34	76.06
Bra019657.1-P	Field mustard	plasma membrane	69.06	75.53
Bra026835.1-P	Field mustard	plasma membrane	69.06	75.53
CDY33752	Canola	plasma membrane	69.06	75.53
CDY49089	Canola	plasma membrane	69.06	75.53
KRH69315	Soybean	plasma membrane	68.78	75.45
PGSC0003DMT400002255	Potato	plastid	49.17	75.42
AT1G14360.1	Thale cress	plasma membrane	68.51	74.92
VIT_01s0026g01890.t01	Wine grape	extracellular	68.51	74.7
CDY39320	Canola	plasma membrane	68.23	74.62
CDY41674	Canola	plasma membrane	67.96	74.1
PGSC0003DMT400065812	Potato	plasma membrane	67.68	73.8
Solyc01g010650.2.1	Tomato	plasma membrane	67.68	73.57
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	68.51	72.94
AT2G02810.1	Thale cress	plasma membrane	66.3	72.29
GSMUA_AchrUn_...	Banana	plasma membrane	70.17	71.95
Solyc05g007150.2.1	Tomato	plasma membrane	67.96	70.49
CDY09353	Canola	plasma membrane	67.96	67.4
Bra026579.1-P	Field mustard	peroxisome	62.15	62.15
GSMUA_Achr10P...	Banana	extracellular	22.38	58.27
KRG99133	Soybean	extracellular	20.44	58.27
EES17597	Sorghum	peroxisome, plasma membrane, vacuole	27.07	27.3
EER95630	Sorghum	golgi, peroxisome, plasma membrane	17.4	17.85
PGSC0003DMT400000700	Potato	endoplasmic reticulum	3.59	16.67

Protein Annotations

MapMan:24.2.1.1.5	EntrezGene:8079335	UniProt:C5Z586	EnsemblPlants:EER88586	ProteinID:EER88586	ProteinID:EER88586.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005459	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0030173	GO:GO:0030176	GO:GO:0055085	GO:GO:0072334	PFAM:PF08449
PANTHER:PTHR10778	PANTHER:PTHR10778:SF10	EnsemblPlantsGene:SORBI_3010G178800	SUPFAM:SSF103481	unigene:Sbi.2140	TMHMM:TMhelix
InterPro:UAA	UniParc:UPI0001A89380	RefSeq:XP_002437219.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:51683062..51687453

Molecular Weight (calculated)

40144.4 Da

IEP (calculated)

10.381

GRAVY (calculated)

0.218

Length

362 amino acids

Sequence
(BLAST)

001: MAVVRLRGNG ANGVVRPRPR DRGARGGGGS MAGRVAVLAF CVAGIWSAYI YQGVLQETLS TKRFGPEGRR FEHLAFLNFA QNVLCFVWSF IMIKLWSGGS
101: SSNGRAPLWK YWGVSVTNTI GPTMGIEALK YISYPAQVLA KSSKMIPVML MGTLLYGVKY TLPEYFCTFL VAGGVSSFAL LKTSSKTIKK LANPNAPLGY
201: TLCFLNLAFD GYTNSTQDLI KSRYPKTNPW DIMLGMNLWG TIYNAVIMFA APLLFSNWPY ANGFEALRFC QENPEVAWDI FLFCLCGAVG QNFIFLTISR
301: FGSLTNTTIT TTRKFMSIVV SSVISGNPLS LKQWGSVVMV FLGLSIQIYL KWKKKKGRDH KE

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.