Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400065812 | Potato | plasma membrane | 91.12 | 95.78 |
| Solyc01g010650.2.1 | Tomato | plasma membrane | 85.39 | 89.49 |
| VIT_01s0026g01890.t01 | Wine grape | extracellular | 82.23 | 86.45 |
| KRH74812 | Soybean | plasma membrane | 81.66 | 86.36 |
| KRH69315 | Soybean | plasma membrane | 81.09 | 85.76 |
| Bra026835.1-P | Field mustard | plasma membrane | 81.09 | 85.5 |
| CDY33752 | Canola | plasma membrane | 81.09 | 85.5 |
| AT1G14360.1 | Thale cress | plasma membrane | 80.23 | 84.59 |
| Bra019657.1-P | Field mustard | plasma membrane | 80.23 | 84.59 |
| CDY49089 | Canola | plasma membrane | 80.23 | 84.59 |
| CDY39320 | Canola | plasma membrane | 79.94 | 84.29 |
| AT2G02810.1 | Thale cress | plasma membrane | 76.79 | 80.72 |
| CDY41674 | Canola | plasma membrane | 76.79 | 80.72 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 78.8 | 77.9 |
| CDY09353 | Canola | plasma membrane | 76.79 | 73.42 |
| Os06t0593100-01 | Rice | golgi, peroxisome, plasma membrane | 69.91 | 68.16 |
| EER88586 | Sorghum | mitochondrion | 70.49 | 67.96 |
| TraesCS7D01G353100.1 | Wheat | golgi, mitochondrion, plasma membrane | 69.63 | 67.88 |
| Zm00001d046467_P001 | Maize | golgi, peroxisome, plasma membrane | 70.2 | 67.87 |
| HORVU7Hr1G085180.1 | Barley | golgi, mitochondrion, plastid | 69.34 | 67.79 |
| TraesCS7B01G258500.1 | Wheat | golgi, mitochondrion, plastid | 69.05 | 67.51 |
| TraesCS7A01G370000.1 | Wheat | golgi, mitochondrion, plasma membrane | 69.63 | 67.5 |
| Bra026579.1-P | Field mustard | peroxisome | 69.91 | 67.4 |
| GSMUA_Achr10P... | Banana | extracellular | 25.21 | 63.31 |
| Zm00001d036940_P003 | Maize | cytosol, mitochondrion, plasma membrane | 66.19 | 61.6 |
| Zm00001d036936_P002 | Maize | endoplasmic reticulum, mitochondrion, peroxisome | 53.87 | 55.29 |
| Solyc11g073190.1.1 | Tomato | peroxisome, plasma membrane, vacuole | 24.93 | 28.81 |
| Solyc06g005290.2.1 | Tomato | peroxisome | 27.79 | 28.03 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 19.77 | 21.7 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 20.63 | 20.22 |
Protein Annotations
| MapMan:24.2.1.1.5 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005459 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0030173 | GO:GO:0030176 | GO:GO:0055085 | GO:GO:0072334 |
| UniProt:K4BWP1 | PFAM:PF08449 | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF10 | EnsemblPlantsGene:Solyc05g007150.2 | EnsemblPlants:Solyc05g007150.2.1 |
| TMHMM:TMhelix | InterPro:UAA | UniParc:UPI0002765A96 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5:+:1746851..1751800
Molecular Weight (calculated)
38788.7 Da
IEP (calculated)
10.047
GRAVY (calculated)
0.250
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAHGAGLRR VLVLAFCVAG IWSAYIYQGV LQETVSTKRF GPNNERFEHL AFLNLAQNVV CLVWSFIMIK IWSNGKSGGA PWWSYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMFMGTLVY GIRYTIPEYV CSLLVAGGVS LFALSKTSSK TISKLAHPNA PLGYGLCFLN LTFDGFTNAT QDSISARYPK
201: TSAWDIMFGM NLWGTIYNMM FMFGWSTASG YEAVQFCKQH PEAAWDILLY CLCGAVGQNF IFLTISRFGS LTNTTITTTR KFVSIVVSSV LSGNPLSEKQ
301: WTSVGMVFSG LSYQIYLKWR KLQRMTKKRK PLIPGGTTLP LLDKIIKKN
101: EALKYISYPA QVLAKSSKMI PVMFMGTLVY GIRYTIPEYV CSLLVAGGVS LFALSKTSSK TISKLAHPNA PLGYGLCFLN LTFDGFTNAT QDSISARYPK
201: TSAWDIMFGM NLWGTIYNMM FMFGWSTASG YEAVQFCKQH PEAAWDILLY CLCGAVGQNF IFLTISRFGS LTNTTITTTR KFVSIVVSSV LSGNPLSEKQ
301: WTSVGMVFSG LSYQIYLKWR KLQRMTKKRK PLIPGGTTLP LLDKIIKKN
001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A
Arabidopsis Description
UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.