Factsheet for Solyc08g080270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400058582	Potato	plasma membrane	96.54	87.71
HORVU4Hr1G085820.1	Barley	plasma membrane	78.3	73.45
Bra016764.1-P	Field mustard	cytosol, peroxisome, plasma membrane	80.5	73.14
VIT_02s0025g04490.t01	Wine grape	plasma membrane	80.5	73.14
CDY70445	Canola	cytosol, peroxisome, plasma membrane	80.5	73.14
CDY58606	Canola	cytosol, peroxisome, plasma membrane	79.56	72.29
AT1G12600.1	Thale cress	plasma membrane	79.25	72.21
Bra019340.1-P	Field mustard	plasma membrane	78.3	71.97
EER95630	Sorghum	golgi, peroxisome, plasma membrane	79.25	71.39
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	77.99	71.06
TraesCS4D01G347700.1	Wheat	plasma membrane	77.67	70.98
TraesCS4B01G353800.1	Wheat	plasma membrane	77.67	70.37
TraesCS5A01G521500.1	Wheat	plasma membrane	77.67	69.97
CDX94144	Canola	plasma membrane	78.3	69.17
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	77.36	69.1
Bra013669.1-P	Field mustard	plasma membrane	77.04	69.01
Zm00001d048499_P001	Maize	plasma membrane	77.67	67.12
AT4G23010.3	Thale cress	plasma membrane	76.73	62.24
CDY41258	Canola	plasma membrane	76.73	61.0
CDX98783	Canola	plasma membrane	70.44	59.73
CDY10844	Canola	plasma membrane	76.42	56.38
Solyc11g073190.1.1	Tomato	peroxisome, plasma membrane, vacuole	21.07	22.19
Solyc06g005290.2.1	Tomato	peroxisome	23.9	21.97
Solyc01g010650.2.1	Tomato	plasma membrane	21.38	20.42
Solyc05g007150.2.1	Tomato	plasma membrane	21.7	19.77

Protein Annotations

MapMan:24.2.1.1.5	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0030173	GO:GO:0030176	GO:GO:0046964	GO:GO:0055085	GO:GO:1902559
UniProt:K4CP27	PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF19	SUPFAM:SSF103481	EnsemblPlantsGene:Solyc08g080270.2
EnsemblPlants:Solyc08g080270.2.1	TMHMM:TMhelix	InterPro:UAA	UniParc:UPI000276B8CA	:	:

Description

No Description!

Coordinates

chr8:-:63578080..63581659

Molecular Weight (calculated)

35307.0 Da

IEP (calculated)

8.853

GRAVY (calculated)

0.625

Length

318 amino acids

Sequence
(BLAST)

001: MKNDDQARFL FGISLTDKPK WQQFLICSSG FFFGYLVNGL CEEYVYNRLG FSYGWYFTFV QGFVYLFLIR IQGFTTKQMV NPWKIYVKLS VVLMCSHGLT
101: KGSLAYLNYP AQIMSKSTKV LPVMVVGAFM PSLRRKYPVQ EYVSAVLFVG GLIFFTLADA NTSPNFSIIG VIMISGALVM DSFLGNLQEA IFTLNPDTSQ
201: MEMLFCSTVV GAPVLLLPMI LTGELLVAWK SCSEHPYVYG VLVFEAMATF IGQISVLSLI AIFGAAATAM VTTARKAVTL LLSYLIFTKP LTEQHFSGLL
301: LISMGIVSRL LPDSKPPQ

Best Arabidopsis Sequence Match ( AT1G12600.1 )
(BLAST)

001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV

Arabidopsis Description

UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.