Factsheet for Bra019340.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94144	Canola	plasma membrane	100.0	96.11
Bra013669.1-P	Field mustard	plasma membrane	89.02	86.76
AT4G23010.3	Thale cress	plasma membrane	95.66	84.44
VIT_02s0025g04490.t01	Wine grape	plasma membrane	80.06	79.14
KRH00671	Soybean	endoplasmic reticulum	81.79	79.05
KRH40518	Soybean	plasma membrane	81.5	78.77
Solyc08g080270.2.1	Tomato	plasma membrane	71.97	78.3
Bra016764.1-P	Field mustard	cytosol, peroxisome, plasma membrane	79.19	78.29
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	78.61	77.94
HORVU4Hr1G085820.1	Barley	plasma membrane	75.72	77.29
VIT_15s0048g01060.t01	Wine grape	plasma membrane	77.46	77.01
GSMUA_Achr1P07960_001	Banana	plasma membrane	75.72	76.38
TraesCS4B01G353800.1	Wheat	plasma membrane	77.46	76.35
TraesCS5A01G521500.1	Wheat	plasma membrane	77.46	75.92
TraesCS4D01G347700.1	Wheat	plasma membrane	75.14	74.71
EER95630	Sorghum	golgi, peroxisome, plasma membrane	75.72	74.22
PGSC0003DMT400058582	Potato	plasma membrane	73.7	72.86
Zm00001d048499_P001	Maize	plasma membrane	74.57	70.11
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	71.97	69.94
PGSC0003DMT400000002	Potato	plasma membrane	55.2	68.95
KRG88431	Soybean	plasma membrane	29.48	65.81
KRH65169	Soybean	plasma membrane	41.33	46.58
KRH65174	Soybean	plasma membrane	41.04	46.1
Bra019657.1-P	Field mustard	plasma membrane	20.81	21.75
Bra026835.1-P	Field mustard	plasma membrane	20.52	21.45
Bra006695.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.36	20.81
Bra002536.1-P	Field mustard	plasma membrane	20.52	20.7
Bra026579.1-P	Field mustard	peroxisome	20.52	19.61

Protein Annotations

EnsemblPlants:Bra019340.1	EnsemblPlants:Bra019340.1-P	EnsemblPlantsGene:Bra019340	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:UAA	PANTHER:PTHR10778	PANTHER:PTHR10778:SF19
PFAM:PF08449	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002540E13	UniProt:M4DS47	MapMan:24.2.1.1.5

Description

AT4G23010 (E=2e-172) ATUTR2, UTR2 | UDP-galactose transporter-related

Coordinates

chrA03:-:24809735..24811993

Molecular Weight (calculated)

38599.0 Da

IEP (calculated)

8.788

GRAVY (calculated)

0.487

Length

346 amino acids

Sequence
(BLAST)

001: MKNEEQSRSL FGISLSDRPT WQQFLICTSG FFFGYLVNGV CEEYVYNRLQ FSFGWYFTFI QGFVYLFLIY LQGFTTKHIV NPMRTYVKLS AVLMGSHGLT
101: KGSLAYLNYP AQIMFKSTKV LPVMIMGAFI PGLRRKYPVH EYISAFLLVL GLILFTLADA QMSPNFSMIG ILMITGALIM DAFLGNLQEA IFTMNPETTQ
201: MEMLFCSTVV GLPFLFVPMV LTGELFRAWT ACWQHPYVYG VLVFEAMATF IGQVSVLSLI ALFGAATTAL ITTARKGVTL LLSYLIFTKP LTEQHGSGLL
301: LIAMGIVLKM VPMDSKPPSK IPARPAARNA GGEGGREEEE ERKSLV

Best Arabidopsis Sequence Match ( AT4G23010.3 )
(BLAST)

001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV

Arabidopsis Description

UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.