CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
vacuole 2
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65169	Soybean	plasma membrane	96.75	97.07
KRG88431	Soybean	plasma membrane	47.73	94.84
KRH00671	Soybean	endoplasmic reticulum	52.6	45.25
KRH40518	Soybean	plasma membrane	51.95	44.69
VIT_15s0048g01060.t01	Wine grape	plasma membrane	50.32	44.54
Bra016764.1-P	Field mustard	cytosol, peroxisome, plasma membrane	48.38	42.57
CDY70445	Canola	cytosol, peroxisome, plasma membrane	48.38	42.57
AT1G12600.1	Thale cress	plasma membrane	48.05	42.41
CDY58606	Canola	cytosol, peroxisome, plasma membrane	47.73	42.0
GSMUA_Achr1P07960_001	Banana	plasma membrane	45.78	41.11
Bra019340.1-P	Field mustard	plasma membrane	46.1	41.04
EER95630	Sorghum	golgi, peroxisome, plasma membrane	46.1	40.23
CDX94144	Canola	plasma membrane	46.1	39.44
Os03t0118200-01	Rice	golgi, peroxisome, plasma membrane	44.48	39.26
TraesCS4B01G353800.1	Wheat	plasma membrane	44.48	39.03
TraesCS5A01G521500.1	Wheat	plasma membrane	44.48	38.81
HORVU4Hr1G085820.1	Barley	plasma membrane	42.53	38.64
TraesCS4D01G347700.1	Wheat	plasma membrane	42.86	37.93
Zm00001d048499_P001	Maize	plasma membrane	45.13	37.77
Bra013669.1-P	Field mustard	plasma membrane	43.51	37.75
Solyc01g091840.2.1	Tomato	endoplasmic reticulum, plasma membrane	43.18	37.36
PGSC0003DMT400000002	Potato	plasma membrane	32.79	36.46
AT4G23010.3	Thale cress	plasma membrane	45.45	35.71
CDY41258	Canola	plasma membrane	43.51	33.5
CDX98783	Canola	plasma membrane	38.96	32.0
CDY10844	Canola	plasma membrane	43.18	30.86
KRH29863	Soybean	extracellular, mitochondrion, plasma membrane	11.69	16.51
KRG99133	Soybean	extracellular	5.52	13.39
KRH24858	Soybean	plasma membrane	14.29	12.46
KRH10309	Soybean	plasma membrane	13.64	11.97
KRH23010	Soybean	cytosol, peroxisome, plasma membrane	13.64	11.93
KRH69315	Soybean	plasma membrane	12.66	11.82
KRH74812	Soybean	plasma membrane	12.66	11.82
KRH29862	Soybean	cytosol	3.25	7.35

Protein Annotations

MapMan:24.2.1.1.5	UniProt:A0A0R0KDN3	EMBL:ACUP02001315	EnsemblPlantsGene:GLYMA_03G018100	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030173	GO:GO:0030176
GO:GO:0046964	GO:GO:0055085	GO:GO:1902559	EnsemblPlants:KRH65174	ProteinID:KRH65174	ProteinID:KRH65174.1
PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF19	SUPFAM:SSF103481	TMHMM:TMhelix	InterPro:UAA
UniParc:UPI0006EDAF2C	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:1803209..1814902

Molecular Weight (calculated)

35165.3 Da

IEP (calculated)

8.690

GRAVY (calculated)

0.250

Length

308 amino acids

Sequence
(BLAST)

001: MSKAAEQARS LFGICLSHRP KWQQFLICSS GFFFGYLVNG ICEKRENNEF IVSFCLWKRG QGEWLGDQSC FWDFHWKFGL QLYYFCMQLY YGWYLAFVQG
101: FVYLFLICLQ GFARKQTEMN QWKTYVKLSA VPMVPMHGGS LAFLDYTNLK SMKMEMLFCS TVVGLPFLIP PMLFTGQLFK AWTSWSRHLY VYGVLVIEAM
201: AAFIGQLSVL SLIAIFGAAN TAMITTARKA VTLLLSYLIF TKPLTEQHAT GLLLIAMGIT MKIFLDDRSN KKALNSSPIA NIPKPSEDKE LMAQSDYAGE
301: HEESRPLV

Best Arabidopsis Sequence Match ( AT1G12600.1 )
(BLAST)

001: MKTNSEEQMI KLFGIPLSDK PRWQQFLICS SGFFFGYLVN GICEEYVYNR LKFSYGWYFT FAQGLVYIAL IYMYGFRTKQ MVNPWKTYVK LSGVLMGSHG
101: LTKGSLAYLN YPAQIMFKST KVLPVMVMGA FIPGLRRKYP VHEYISAMLL VIGLILFTLA DAHTSPNFSI IGVMMISGAL IMDAFLGNLQ EAIFTMNPET
201: TQMEMLFCST VVGLPFLLAP MILTGELFTA WNSCAQHPYV YGVLVFEAMA TFIGQVSVLS LIALFGAATT AMITTARKAV TLLLSYLIFT KPLTEQHGTG
301: LLLIFMGIIL KMVPDPNPNP KSSGSGQTPG KLERVKFEKE DDEESRPLV

Arabidopsis Description

UTR4UDP-galactose/UDP-glucose transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDX3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.