Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013669.1-P | Field mustard | plasma membrane | 88.5 | 99.72 |
| CDX94144 | Canola | plasma membrane | 78.75 | 87.5 |
| AT4G23010.3 | Thale cress | plasma membrane | 81.25 | 82.91 |
| CDY10844 | Canola | plasma membrane | 87.5 | 81.21 |
| HORVU4Hr1G085820.1 | Barley | plasma membrane | 66.5 | 78.47 |
| CDY70445 | Canola | cytosol, peroxisome, plasma membrane | 67.75 | 77.43 |
| Os03t0118200-01 | Rice | golgi, peroxisome, plasma membrane | 67.5 | 77.36 |
| KRH00671 | Soybean | endoplasmic reticulum | 69.0 | 77.09 |
| KRH40518 | Soybean | plasma membrane | 68.75 | 76.82 |
| Solyc08g080270.2.1 | Tomato | plasma membrane | 61.0 | 76.73 |
| VIT_02s0025g04490.t01 | Wine grape | plasma membrane | 67.0 | 76.57 |
| CDY58606 | Canola | cytosol, peroxisome, plasma membrane | 67.0 | 76.57 |
| CDX98783 | Canola | plasma membrane | 71.5 | 76.27 |
| VIT_15s0048g01060.t01 | Wine grape | plasma membrane | 65.75 | 75.57 |
| TraesCS4D01G347700.1 | Wheat | plasma membrane | 65.25 | 75.0 |
| TraesCS4B01G353800.1 | Wheat | plasma membrane | 65.25 | 74.36 |
| GSMUA_Achr1P07960_001 | Banana | plasma membrane | 63.75 | 74.34 |
| EER95630 | Sorghum | golgi, peroxisome, plasma membrane | 65.5 | 74.22 |
| TraesCS5A01G521500.1 | Wheat | plasma membrane | 65.25 | 73.94 |
| PGSC0003DMT400058582 | Potato | plasma membrane | 62.25 | 71.14 |
| Zm00001d048499_P001 | Maize | plasma membrane | 64.75 | 70.38 |
| Solyc01g091840.2.1 | Tomato | endoplasmic reticulum, plasma membrane | 60.75 | 68.26 |
| PGSC0003DMT400000002 | Potato | plasma membrane | 46.75 | 67.51 |
| KRG88431 | Soybean | plasma membrane | 23.75 | 61.29 |
| KRH65174 | Soybean | plasma membrane | 33.5 | 43.51 |
| KRH65169 | Soybean | plasma membrane | 33.25 | 43.32 |
| CDY66447 | Canola | peroxisome | 16.5 | 22.07 |
| CDY41674 | Canola | plasma membrane | 18.25 | 21.99 |
| CDY49577 | Canola | plasma membrane | 18.75 | 21.87 |
| CDY49089 | Canola | plasma membrane | 18.0 | 21.75 |
| CDX80234 | Canola | plasma membrane | 18.5 | 21.57 |
| CDY39320 | Canola | plasma membrane | 17.75 | 21.45 |
| CDY33752 | Canola | plasma membrane | 17.75 | 21.45 |
| CDY60561 | Canola | cytosol, peroxisome, plasma membrane | 18.0 | 20.99 |
| CDX94506 | Canola | extracellular | 5.0 | 20.83 |
| CDY09353 | Canola | plasma membrane | 18.25 | 20.0 |
| CDX88721 | Canola | cytosol, peroxisome, plasma membrane | 18.5 | 19.27 |
| CDX71077 | Canola | cytosol | 18.5 | 17.21 |
Protein Annotations
| EnsemblPlants:CDY41258 | EnsemblPlantsGene:GSBRNA2T00072682001 | GO:A0A078HWW3 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:UAA | PANTHER:PTHR10778 | PANTHER:PTHR10778:SF19 |
| PFAM:PF08449 | ProteinID:CDY41258 | ProteinID:CDY41258.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE7960 |
| UniProt:A0A078HWW3 | MapMan:24.2.1.1.5 | : | : | : | : |
Description
BnaA01g12810DBnaA01g12810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWW3]
Coordinates
chrLK032494:+:97207..101304
Molecular Weight (calculated)
44878.0 Da
IEP (calculated)
9.821
GRAVY (calculated)
0.453
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEEQSRTLF GISLSDRPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI LMISGALIMD AFLGNLQEAI FTMNPETTQA
201: RKHKKKNGSM EMLFCSTVVG LPFLFVPMVL TGELFRAWTA CSQSRFCISY ESSWLIVFML KLTAPFWFMV QIGVSFGLMK KSKFVGFLHP YVYGVLVFEA
301: MATFIGQVSV LSLIALFGAA TTALITTARK GVTLLLSYLI FTKPLTEQHG SGLLLIAMGI VLKMVPMDSK PPSKIQARPA VRKDGGEGER GDEEERKSLV
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI LMISGALIMD AFLGNLQEAI FTMNPETTQA
201: RKHKKKNGSM EMLFCSTVVG LPFLFVPMVL TGELFRAWTA CSQSRFCISY ESSWLIVFML KLTAPFWFMV QIGVSFGLMK KSKFVGFLHP YVYGVLVFEA
301: MATFIGQVSV LSLIALFGAA TTALITTARK GVTLLLSYLI FTKPLTEQHG SGLLLIAMGI VLKMVPMDSK PPSKIQARPA VRKDGGEGER GDEEERKSLV
001: MKEEQTRSLF GISLSDKPTW QQFLICTSGF FFGYLVNGVC EEYVYNRLQF SFGWYFTFIQ GFVYLFLIYL QGFTTKHIVN PMRTYVKLSA VLMGSHGLTK
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV
101: GSLAYLNYPA QIMFKSTKVL PVMIMGAFIP GLRRKYPVHE YISAFLLVLG LILFTLADAQ MSPNFSMIGI MMITGALIMD AFLGNLQEAI FTMNPETTQM
201: EMLFCSTVVG LPFLFVPMVL TGEVFRAWTA CAQSSILSES DKEWNLLFGF ESTSIDLTRF MIQTGVGLSL EKKSKFVGFL HPYVYGVLVF EAMATFIGQV
301: SVLSLIALFG AATTALITTA RKGVTLLLSY LIFTKPLTEQ HGSGLLLIAM GIVLKMVPMD SKAPAKIPAR PAVRIAGGDG DREEDEERKS LV
Arabidopsis Description
UTR2UDP-galactose transporter 2 [Source:TAIR;Acc:AT4G23010]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.