CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG97393
KRH06324
KRH06326
KRH06327
KRH08190
KRH22653
KRH26664
KRH28715
KRH31520
KRH47747
KRH47748
KRH47750
KRH56393
KRH62532
KRH65384
KRH69884
KRH76090
KRH76164
KRH76747

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G14360.1	KRH06324	AT1G01010.1	21798944
AT1G14360.1	KRH06326	AT1G01010.1	21798944
AT1G14360.1	KRH06327	AT1G01010.1	21798944
AT1G14360.1	KRH47747	AT1G01010.1	21798944
AT1G14360.1	KRH47748	AT1G01010.1	21798944
AT1G14360.1	KRH47750	AT1G01010.1	21798944
AT1G14360.1	KRG97393	AT1G27300.1	21798944
AT1G14360.1	KRH31520	AT1G27300.1	21798944
AT1G14360.1	KRH76090	AT1G27300.1	21798944
AT1G14360.1	KRH65384	AT3G60600.1	21798944
AT1G14360.1	KRH76164	AT3G60600.1	21798944
AT1G14360.1	KRH56393	AT4G26455.1	21798944
AT1G14360.1	KRH62532	AT4G26455.1	21798944
AT1G14360.1	KRH08190	AT5G66480.1	21798944
AT1G14360.1	KRH28715	AT5G66480.1	21798944
AT1G14360.1	KRH69884	AT5G66480.1	21798944
AT1G14360.1	KRH76747	AT5G66480.1	21798944
AT2G02810.1	KRH22653	AT5G22290.1	21798944
AT2G02810.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74812	Soybean	plasma membrane	97.88	97.88
Bra026835.1-P	Field mustard	plasma membrane	87.88	87.61
CDY33752	Canola	plasma membrane	87.88	87.61
Solyc01g010650.2.1	Tomato	plasma membrane	87.88	87.09
AT1G14360.1	Thale cress	plasma membrane	87.27	87.01
CDY39320	Canola	plasma membrane	87.27	87.01
PGSC0003DMT400065812	Potato	plasma membrane	87.27	86.75
CDY49089	Canola	plasma membrane	86.97	86.71
Bra019657.1-P	Field mustard	plasma membrane	86.97	86.71
PGSC0003DMT400002255	Potato	plastid	61.52	86.02
VIT_01s0026g01890.t01	Wine grape	extracellular	85.45	84.94
CDY41674	Canola	plasma membrane	83.03	82.53
AT2G02810.1	Thale cress	plasma membrane	82.12	81.63
Solyc05g007150.2.1	Tomato	plasma membrane	85.76	81.09
GSMUA_AchrUn_...	Banana	plasma membrane	82.12	76.77
CDY09353	Canola	plasma membrane	83.03	75.07
KRG99133	Soybean	extracellular	28.48	74.02
Os06t0593100-01	Rice	golgi, peroxisome, plasma membrane	75.15	69.27
Zm00001d046467_P001	Maize	golgi, peroxisome, plasma membrane	75.76	69.25
EER88586	Sorghum	mitochondrion	75.45	68.78
Bra026579.1-P	Field mustard	peroxisome	74.85	68.23
TraesCS7D01G353100.1	Wheat	golgi, mitochondrion, plasma membrane	73.64	67.88
HORVU7Hr1G085180.1	Barley	golgi, mitochondrion, plastid	73.33	67.79
TraesCS7B01G258500.1	Wheat	golgi, mitochondrion, plastid	73.03	67.51
TraesCS7A01G370000.1	Wheat	golgi, mitochondrion, plasma membrane	73.33	67.22
Zm00001d036940_P003	Maize	cytosol, mitochondrion, plasma membrane	71.52	62.93
GSMUA_Achr10P...	Banana	extracellular	24.85	58.99
Zm00001d036936_P002	Maize	endoplasmic reticulum, mitochondrion, peroxisome	59.09	57.35
KRH10309	Soybean	plasma membrane	29.7	27.92
KRH23010	Soybean	cytosol, peroxisome, plasma membrane	29.39	27.56
KRH24858	Soybean	plasma membrane	28.48	26.63
KRH29862	Soybean	cytosol	10.91	26.47
KRH29863	Soybean	extracellular, mitochondrion, plasma membrane	16.97	25.69
KRH00671	Soybean	endoplasmic reticulum	20.61	18.99
KRH40518	Soybean	plasma membrane	20.3	18.72
KRG88431	Soybean	plasma membrane	7.27	15.48
KRH65174	Soybean	plasma membrane	11.82	12.66
KRH65169	Soybean	plasma membrane	11.52	12.38

Protein Annotations

EntrezGene:100812669	MapMan:24.2.1.1.5	EMBL:ACUP02000701	EnsemblPlantsGene:GLYMA_02G019400	GO:GO:0003674	GO:GO:0005215
GO:GO:0005459	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0030173
GO:GO:0030176	GO:GO:0055085	GO:GO:0072334	UniProt:I1JBN2	EnsemblPlants:KRH69315	ProteinID:KRH69315
ProteinID:KRH69315.1	PFAM:PF08449	PANTHER:PTHR10778	PANTHER:PTHR10778:SF10	TMHMM:TMhelix	InterPro:UAA
UniParc:UPI000233713B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:1724231..1728189

Molecular Weight (calculated)

36835.2 Da

IEP (calculated)

9.793

GRAVY (calculated)

0.286

Length

330 amino acids

Sequence
(BLAST)

001: MEAHGGGLRR ILVLAFCVAG IWSAYIYQGV LQENVSTKRF NGERFEHLAF LNLAQNVVCL IWSFIMIKMW ASGNSGGAPW WSYWSAGITN TIGPAMGIEA
101: LKYISYPAQV LAKSSKMIPV MLMGTLVYGI RYTFPEYLCT FLVAGGVSTF ALLKTSSKTI SKLAHPNAPL GYGLCFLNLA FDGFTNATQD SLKARYPKTS
201: AWDIMLGMNL WGTIYNMIYM FGWPHASGFE AVRFCQHHPE AAWDIFLYCC CGAVGQNFIF LTISRFGSLA NTTITTTRKF VSIVVSSLLS GNPLSTKQWG
301: CVSMVFSGLS YQIYLKWQKL QRLQKKRKAM

Best Arabidopsis Sequence Match ( AT1G14360.1 )
(BLAST)

001: MESHGSGLRR VLLLSFCVAG IWAAYIYQGI LQETLSTKKF GEDGKRFEHL AFLNLAQNVI CLVWSYIMIK LWSNGGSGGA PWWTYWSAGI TNTIGPAMGI
101: EALKYISYPA QVLAKSSKMI PVMLMGSLVY GIRYTLPEYL CTFLVAGGVS MFALLKTSSK TISKLAHPNA PLGYGLCFLN LAFDGFTNAT QDSITARYPK
201: TNAWDIMLGM NLWGTIYNMV YMFGLPHGSG FEAVQFCKQH PEAAWDILMY CLCGAVGQNF IFLTISRFGS LANTTITTTR KFVSIVVSSV LSGNPLSSKQ
301: WGCVSMVFGG LSYQIYLKWR KLQRMQKKKK A

Arabidopsis Description

UTR3UDP-galactose/UDP-glucose transporter 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.