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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG90387
KRG90848
KRG91881
KRG92302
KRG98671
KRH04043
KRH08383
KRH13519
KRH14303
KRH21829
KRH25396
KRH25560
KRH28013
KRH31721
KRH34500
KRH34890
KRH35929
KRH41049
KRH46259
KRH52827
KRH53288
KRH54078
KRH55976
KRH56106
KRH57311
KRH59722
KRH62124
KRH63883
KRH64617
KRH70041
KRH73827
KRH73866
KRH75962
KRH77425

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G01010.1 KRH52827 AT1G10030.1 21798944
AT1G01010.1 KRH62124 AT1G10030.1 21798944
AT1G01010.1 KRH04043 AT1G12390.1 21798944
AT1G01010.1 KRH28013 AT1G12390.1 21798944
AT1G01010.1 KRH57311 AT1G12390.1 21798944
AT1G01010.1 KRH77425 AT1G12390.1 21798944
AT1G01010.1 KRG98671 AT1G16240.1 21798944
AT1G01010.1 KRH14303 AT1G16240.1 21798944
AT1G01010.1 KRH46259 AT1G16240.1 21798944
AT1G01010.1 KRH73827 AT1G16240.1 21798944
AT1G01010.1 KRH13519 AT1G17080.1 21798944
AT1G01010.1 KRH21829 AT1G17080.1 21798944
AT1G01010.1 KRH53288 AT1G77350.1 21798944
AT1G01010.1 KRH64617 AT1G77350.1 21798944
AT1G01010.1 KRH25560 AT2G20740.1 21798944
AT1G01010.1 KRH55976 AT2G20740.1 21798944
AT1G01010.1 KRH25396 AT2G32380.1 21798944
AT1G01010.1 KRH56106 AT2G32380.1 21798944
AT1G01010.1 KRG91881 AT3G07950.1 21798944
AT1G01010.1 KRH08383 AT3G07950.1 21798944
AT1G01010.1 KRH34890 AT3G07950.1 21798944
AT1G01010.1 KRH70041 AT3G07950.1 21798944
AT1G01010.1 KRH75962 AT3G07950.1 21798944
AT1G01010.1 KRG90848 AT4G14730.1 21798944
AT1G01010.1 KRH35929 AT4G14730.1 21798944
AT1G01010.1 KRG90387 AT5G43460.1 21798944
AT1G01010.1 KRG92302 AT5G43460.1 21798944
AT1G01010.1 KRH31721 AT5G43460.1 21798944
AT1G01010.1 KRH34500 AT5G43460.1 21798944
AT1G01010.1 KRH73866 AT5G43460.1 21798944
AT1G01010.1 KRH41049 AT5G51010.1 21798944
AT1G01010.1 KRH54078 AT5G51010.1 21798944
AT1G01010.1 KRH59722 AT5G51010.1 21798944
AT1G01010.1 KRH63883 AT5G51010.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH06324 Soybean cytosol 36.02 67.04
KRH47750 Soybean cytosol 23.14 37.34
KRH47748 Soybean cytosol 24.75 30.37
KRH06327 Soybean cytosol 24.35 30.25
CDY07138 Canola nucleus 17.5 30.21
Bra027596.1-P Field mustard nucleus 14.69 30.17
CDX90132 Canola nucleus 7.44 30.08
Bra010895.1-P Field mustard nucleus 7.44 30.08
CDY59815 Canola cytosol 16.1 29.96
AT1G02210.1 Thale cress cytosol, nucleus, plastid 5.23 29.89
CDY32449 Canola nucleus 13.08 29.02
CDY32450 Canola nucleus 13.08 29.02
Bra036328.1-P Field mustard nucleus 16.7 28.82
KRH06326 Soybean nucleus 24.75 28.54
AT3G04430.1 Thale cress nucleus 11.27 28.28
Bra032615.1-P Field mustard nucleus 12.68 28.12
CDY11741 Canola nucleus 7.85 28.06
CDY15223 Canola nucleus 11.67 27.36
CDY55326 Canola nucleus 13.08 26.86
CDY15220 Canola nucleus 10.87 26.73
CDY15210 Canola cytosol, nucleus, plastid 13.68 26.25
CDY55325 Canola nucleus 13.08 25.59
CDX89996 Canola nucleus 13.28 25.58
AT4G01520.1 Thale cress nucleus 15.29 25.17
Bra033299.1-P Field mustard nucleus 12.47 24.7
CDY15214 Canola nucleus 14.69 24.66
Bra033297.1-P Field mustard nucleus 11.07 24.44
CDX89994 Canola nucleus 12.27 24.3
Os06t0101800-01 Rice nucleus 17.5 24.23
Bra033302.1-P Field mustard nucleus 12.47 23.85
CDX89991 Canola nucleus 12.27 22.68
AT1G02230.1 Thale cress nucleus 15.9 22.01
CDX89995 Canola nucleus 15.69 21.97
Bra036327.1-P Field mustard cytosol 18.51 21.65
CDY59814 Canola cytosol 18.51 21.65
CDY07135 Canola nucleus 16.1 21.56
CDY07136 Canola cytosol 18.31 21.36
Bra036326.1-P Field mustard nucleus 15.9 21.35
TraesCS7A01G000300.1 Wheat nucleus 22.54 21.21
Bra033305.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 11.87 20.92
Bra033298.1-P Field mustard nucleus 15.09 20.05
AT4G01550.1 Thale cress cytosol, golgi, nucleus 18.11 19.69
AT3G04420.1 Thale cress nucleus 13.48 19.59
CDX89999 Canola nucleus 18.71 19.58
Bra033296.1-P Field mustard nucleus 18.71 19.58
TraesCS4A01G499900.1 Wheat plastid 22.54 19.44
AT1G02250.1 Thale cress nucleus 14.08 19.34
CDY15212 Canola nucleus 16.5 19.29
CDX97252 Canola cytosol 16.5 19.2
CDY59812 Canola cytosol 17.3 19.07
CDY15217 Canola nucleus 13.28 18.91
Bra008553.1-P Field mustard cytosol, nucleus, plasma membrane 16.7 18.74
TraesCS7D01G000200.1 Wheat plastid 21.13 18.72
HORVU7Hr1G000910.1 Barley nucleus 19.72 18.49
CDY15224 Canola cytosol 13.68 18.18
AT1G02220.1 Thale cress nucleus 14.29 18.02
Bra033306.1-P Field mustard nucleus 13.88 17.97
AT1G01010.1 Thale cress nucleus 15.29 17.72
CDY15215 Canola nucleus 15.09 17.65
CDY15218 Canola nucleus 12.88 17.53
AT4G01540.1 Thale cress cytosol 16.3 17.12
CDY01928 Canola cytosol, nucleus, vacuole 16.5 16.87
Bra033303.1-P Field mustard nucleus 12.88 16.67
Zm00001d045617_P001 Maize nucleus, plasma membrane, vacuole 19.11 15.55
EER87676 Sorghum plastid 19.52 15.04
CDX89990 Canola nucleus 11.67 14.65
Bra033308.1-P Field mustard nucleus 11.67 14.65
CDY15221 Canola cytosol, nucleus, peroxisome 12.47 14.59
Bra033300.1-P Field mustard nucleus 13.28 14.38
CDX89993 Canola nucleus 13.28 14.13
CDY15225 Canola nucleus 10.46 13.03
Protein Annotations
EntrezGene:100778190MapMan:15.5.17Gene3D:3.30.310.150EMBL:ACUP02004162EnsemblPlantsGene:GLYMA_07G047900GO:GO:0003674
GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016021InterPro:IPR003441InterPro:IPR036093
UniProt:K7KZN8EnsemblPlants:KRH47747ProteinID:KRH47747ProteinID:KRH47747.1InterPro:NAC-domInterPro:NAC_dom_sf
PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF57SUPFAM:SSF101941TMHMM:TMhelix
UniParc:UPI0002338517SEG:seg::::
Description
hypothetical protein
Coordinates
chr7:+:4016419..4019905
Molecular Weight (calculated)
56743.5 Da
IEP (calculated)
6.048
GRAVY (calculated)
-0.592
Length
497 amino acids
Sequence
(BLAST)
001: MENNIISICD HMPVGFRFRP TDEELVNYYL KHKLLADDFP VHIIPEIDLC KVEPWDVPER SVIKSDDPEW FFFSPVDYKY LKSKRFNRTT KRGYWKTTGN
101: DRNVKIPGTS NVIGTKKTLV FHEGRGPRGV KTNWVIHEYH AVTSHESQRA FVLCRLMKKA EKKNEGGIEA PTFDEGEPSV HLFSDYGNQV DIIPGVDMEE
201: IFQAVDRAEK FSPPVQRSQT GIGLEDFFAN SPLFNAHFGS ENINMQTSLE VTDDEELVNS FWVDDEEFVI NEERRHCFVN SSTQPKSFRR VYNESSEIDA
301: EVVSNLNEHI SADEYPALKM FQSSYDVRGG TSRLASNHKA NKEKKESIIP DDFWAVETSS CDSTADEPIE ISSSPSTPTR MKNQCHLRPD KFILQRTVAG
401: RPQTQKKVSN NAVSHVEVRK ELLTVKSEKD QKNAQNASLR GNFKNKSQQS SDVNNNGSFF YMETASNRSL FPRSVYLVNV VIGILLLIVI SWDVLSC
Best Arabidopsis Sequence Match ( AT1G33060.1 )
(BLAST)
001: MNQIKNKTLP EMTTEQALLS MEALPLGFRF RPTDEELINH YLRLKINGRD LEVRVIPEID VCKWEPWDLP GLSVIKTDDQ EWFFFCPRDR KYPSGHRSNR
101: ATDIGYWKAT GKDRTIKSKK MIIGMKKTLV FYRGRAPRGE RTNWIMHEYR ATDKELDGTG PGQNPYVLCR LFHKPSDSCD PAHCEEIEKV NFTPTTTTRC
201: SPDDTSSEMV QETATSGVHA LDRSDDTERC LSDKGNNDVK PDVSVINNTS VNHAETSRAK DRNLGKTLVE ENPLLRDVPT LHGPILSEKS YYPGQSSIGF
301: ATSHMDSMYS SDFGNCDYGL HFQDGASEQD ASLTDVLDEV FHNHNESSND RKDFVLPNMM HWPGNTRLLS TEYPFLKDSV AFVDGSAEVS GSQQFVPDIL
401: ASRWVSEQNV DSKEAVEILS STGSSRTLTP LHNNVFGQYA SSSYAAIDPF NYNVNQPEQS SFEQSHVDRN ISPSNIFEFK ARSRENQRDL DSVVDQGTAP
501: RRIRLQIEQP LTPVTNKKER DADNYEEEDE VQSAMSKVVE EEPANLSAQG TAQRRIRLQT RLRKPLITLN NTKRNSNGRE GEASHRKEKE DISSSSSWQK
601: QKKSLVQFSS VVIIVAVIVV LVEIWKESRD AKCSFLFHQL DSFKGMFT
Arabidopsis Description
NAC014NAC014 [Source:UniProtKB/TrEMBL;Acc:A0A178WRQ2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.