Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77425 | Soybean | plasma membrane | 91.82 | 75.94 |
| KRH57311 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 79.09 | 63.5 |
| KRH04043 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 76.36 | 61.31 |
| CDY32198 | Canola | plasma membrane | 58.18 | 56.64 |
| Bra039259.1-P | Field mustard | endoplasmic reticulum | 58.18 | 56.64 |
| VIT_02s0025g05160.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 70.0 | 55.8 |
| AT1G12340.1 | Thale cress | extracellular, plasma membrane, plastid | 64.55 | 55.04 |
| Solyc06g060550.2.1 | Tomato | extracellular, plasma membrane, vacuole | 66.36 | 52.52 |
| AT1G12390.1 | Thale cress | endoplasmic reticulum, extracellular | 64.55 | 51.82 |
| PGSC0003DMT400045318 | Potato | endoplasmic reticulum, extracellular, vacuole | 65.45 | 51.8 |
| GSMUA_Achr3P11390_001 | Banana | plasma membrane | 47.27 | 51.49 |
| CDY21049 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.64 | 51.09 |
| CDY26562 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.64 | 51.09 |
| CDY15996 | Canola | endoplasmic reticulum | 62.73 | 50.37 |
| CDY30076 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.73 | 50.37 |
| CDY31264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 62.73 | 50.37 |
| CDX98068 | Canola | endoplasmic reticulum, extracellular, vacuole | 62.73 | 50.37 |
| Bra019762.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 62.73 | 50.37 |
| CDY45964 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 60.91 | 49.26 |
| AT1G62880.1 | Thale cress | endoplasmic reticulum, extracellular | 60.91 | 48.91 |
| PGSC0003DMT400032506 | Potato | endoplasmic reticulum, extracellular, vacuole | 60.0 | 47.48 |
| TraesCS4A01G373700.1 | Wheat | endoplasmic reticulum | 57.27 | 47.01 |
| TraesCS7A01G075500.1 | Wheat | endoplasmic reticulum | 57.27 | 47.01 |
| GSMUA_Achr9P00470_001 | Banana | plasma membrane | 57.27 | 47.01 |
| TraesCS7D01G071100.1 | Wheat | endoplasmic reticulum | 57.27 | 47.01 |
| Solyc08g007510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 59.09 | 46.76 |
| EER87801 | Sorghum | endoplasmic reticulum | 57.27 | 46.67 |
| Bra016774.1-P | Field mustard | plasma membrane | 64.55 | 41.04 |
| Os06t0136500-01 | Rice | golgi, plasma membrane, vacuole | 30.91 | 40.96 |
| KRH40600 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 40.44 |
| KRH67017 | Soybean | plasma membrane | 42.73 | 39.5 |
| GSMUA_Achr10P... | Banana | plasma membrane | 56.36 | 39.24 |
| KRH00566 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 48.18 | 38.97 |
| AT4G12090.1 | Thale cress | endoplasmic reticulum | 47.27 | 38.52 |
| CDY47431 | Canola | endoplasmic reticulum, extracellular | 46.36 | 37.78 |
| Bra033120.1-P | Field mustard | endoplasmic reticulum, extracellular | 46.36 | 37.78 |
| CDY04395 | Canola | endoplasmic reticulum, extracellular | 46.36 | 37.78 |
| KRG95334 | Soybean | plasma membrane | 43.64 | 33.8 |
| Bra027009.1-P | Field mustard | plasma membrane | 61.82 | 33.01 |
| KRH33017 | Soybean | plasma membrane | 40.0 | 28.57 |
| CDY45478 | Canola | plasma membrane | 60.91 | 27.57 |
| KRH71885 | Soybean | plasma membrane | 41.82 | 27.06 |
Protein Annotations
| EntrezGene:100813058 | MapMan:35.1 | UniProt:A0A0R0HB02 | EMBL:ACUP02006738 | InterPro:Cornichon | EnsemblPlantsGene:GLYMA_11G029100 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 |
| EnsemblPlants:KRH28013 | ProteinID:KRH28013 | ProteinID:KRH28013.1 | PFAM:PF03311 | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 |
| SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI0003DE78EA | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:2111851..2114533
Molecular Weight (calculated)
13343.6 Da
IEP (calculated)
7.431
GRAVY (calculated)
0.613
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLCLADLEF DYINPYDSSA RINMVVLPEY ITQAVLCCFY LLTKHWILAL FFLPYLFHNV RLYRQGRHLV DVTEIFNLLT WEKKQRLVKL FYLVFTLFLS
101: VFWMIYTSLD
101: VFWMIYTSLD
001: MRGVTETDKL ANGIFHLVCL ADLEFDYINP YDSASRINSV VLPEFIVQGV LCVFYLLTGH WFMTLLCLPY LYYNFHLYSK RQHLVDVTEI FNLLNWEKKK
101: RLFKLAYIVL NLFLTIFWMI YSALDDYED
101: RLFKLAYIVL NLFLTIFWMI YSALDDYED
Arabidopsis Description
Probable protein cornichon homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDD7]
SUBAcon: [extracellular,plasma membrane,plastid]
SUBAcon: [extracellular,plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.