CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33017	Soybean	plasma membrane	73.53	81.17
KRH67017	Soybean	plasma membrane	49.41	70.59
KRG95334	Soybean	plasma membrane	54.12	64.79
VIT_08s0007g07860.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	45.29	58.78
Zm00001d041744_P001	Maize	endoplasmic reticulum, extracellular, vacuole	41.76	50.71
CDY08445	Canola	endoplasmic reticulum	41.76	48.63
CDY50566	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.76	48.63
Os12t0506400-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	42.35	48.32
GSMUA_Achr6P36290_001	Banana	golgi, plasma membrane, vacuole	42.35	48.32
Bra034769.1-P	Field mustard	endoplasmic reticulum	41.18	47.95
CDY42135	Canola	endoplasmic reticulum	41.18	47.95
CDY52620	Canola	endoplasmic reticulum	41.18	47.95
EES16032	Sorghum	endoplasmic reticulum	41.76	47.65
AT3G12180.1	Thale cress	endoplasmic reticulum	40.59	47.26
TraesCS5A01G104500.1	Wheat	endoplasmic reticulum	41.18	46.98
HORVU5Hr1G028480.1	Barley	cytosol, vacuole	35.88	46.56
TraesCS5B01G108800.1	Wheat	endoplasmic reticulum	40.59	46.31
TraesCS5D01G116400.1	Wheat	endoplasmic reticulum	40.59	45.1
KRH77425	Soybean	plasma membrane	33.53	42.86
KRH28013	Soybean	cytosol	27.06	41.82
Zm00001d035235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	41.18	41.67
KRH57311	Soybean	endoplasmic reticulum, extracellular, plasma membrane	33.53	41.61
KRH40600	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.35	40.44
KRH00566	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.35	40.44
KRH04043	Soybean	endoplasmic reticulum, plasma membrane, vacuole	32.35	40.15
GSMUA_Achr5P22320_001	Banana	plasma membrane	42.94	39.46
Solyc03g063970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	37.65	34.22

Protein Annotations

EMBL:ACUP02001098	EnsemblPlants:KRH71885	EnsemblPlantsGene:GLYMA_02G175400	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:Cornichon	PANTHER:PTHR12290	PANTHER:PTHR12290:SF11
PFAM:PF03311	ProteinID:KRH71885	ProteinID:KRH71885.1	SMART:SM01398	TMHMM:TMhelix	UniParc:UPI0006EDCCFC
UniProt:A0A0R0KXI8	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:28159713..28171581

Molecular Weight (calculated)

19276.8 Da

IEP (calculated)

7.729

GRAVY (calculated)

0.481

Length

170 amino acids

Sequence
(BLAST)

001: MGWNLLFWLV ICFPANIALL ASTFYQVLIL SDLESDYINP FDAASRINYF VLPEYVGQGA LCALCLFTGH WFMFLLTVPV TCYHLRLYVK REHLIDVTEV
101: FRVLNAEKKY RIAKLALYLT VLIVTIFSIG EITDDGGTCR RVTRGAMGWE TPGGGRQSFD VGRCTIKLCT

Best Arabidopsis Sequence Match ( AT3G12180.1 )
(BLAST)

001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF

Arabidopsis Description

Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.