Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52620 | Canola | endoplasmic reticulum | 96.58 | 96.58 |
| CDY08445 | Canola | endoplasmic reticulum | 86.99 | 86.99 |
| CDY42135 | Canola | endoplasmic reticulum | 85.62 | 85.62 |
| AT3G12180.1 | Thale cress | endoplasmic reticulum | 84.25 | 84.25 |
| VIT_08s0007g07860.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 55.48 | 61.83 |
| KRH67017 | Soybean | plasma membrane | 42.47 | 52.1 |
| GSMUA_Achr6P36290_001 | Banana | golgi, plasma membrane, vacuole | 51.37 | 50.34 |
| KRH33017 | Soybean | plasma membrane | 49.32 | 46.75 |
| TraesCS5B01G108800.1 | Wheat | endoplasmic reticulum | 47.26 | 46.31 |
| TraesCS5A01G104500.1 | Wheat | endoplasmic reticulum | 47.26 | 46.31 |
| Os12t0506400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 47.26 | 46.31 |
| KRG95334 | Soybean | plasma membrane | 44.52 | 45.77 |
| EES16032 | Sorghum | endoplasmic reticulum | 46.58 | 45.64 |
| TraesCS5D01G116400.1 | Wheat | endoplasmic reticulum | 47.26 | 45.1 |
| CDY45964 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 41.78 | 44.85 |
| Zm00001d041744_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 42.47 | 44.29 |
| HORVU5Hr1G028480.1 | Barley | cytosol, vacuole | 39.73 | 44.27 |
| CDY32198 | Canola | plasma membrane | 32.88 | 42.48 |
| CDY31264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.73 | 42.34 |
| CDY47431 | Canola | endoplasmic reticulum, extracellular | 39.04 | 42.22 |
| CDY04395 | Canola | endoplasmic reticulum, extracellular | 39.04 | 42.22 |
| KRH71885 | Soybean | plasma membrane | 48.63 | 41.76 |
| CDY21049 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.04 | 41.61 |
| Zm00001d035235_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 47.26 | 41.07 |
| CDY26562 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.36 | 40.88 |
| CDY30076 | Canola | endoplasmic reticulum, extracellular, vacuole | 37.67 | 40.15 |
| CDY15996 | Canola | endoplasmic reticulum | 37.67 | 40.15 |
| CDX98068 | Canola | endoplasmic reticulum, extracellular, vacuole | 37.67 | 40.15 |
| GSMUA_Achr5P22320_001 | Banana | plasma membrane | 50.68 | 40.0 |
| Solyc03g063970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 47.95 | 37.43 |
| CDY45478 | Canola | plasma membrane | 39.73 | 23.87 |
Protein Annotations
| MapMan:35.1 | GO:A0A078IKQ0 | UniProt:A0A078IKQ0 | EnsemblPlants:CDY50566 | ProteinID:CDY50566 | ProteinID:CDY50566.1 |
| InterPro:Cornichon | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016192 | EnsemblPlantsGene:GSBRNA2T00096997001 | PFAM:PF03311 | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 | SMART:SM01398 |
| TMHMM:TMhelix | UniParc:UPI0004EDFFA5 | SEG:seg | : | : | : |
Description
BnaA01g30800DBnaA01g30800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKQ0]
Coordinates
chrLK032922:-:79452..80549
Molecular Weight (calculated)
17282.5 Da
IEP (calculated)
5.969
GRAVY (calculated)
0.858
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWDLFLWII SFVISLALVA SVFYQVICLT DLEADHMNPF ETSICINRLV LPEFLLQGSL CLLFLLTWHW FFFLVSLPVT CYHAMLYNKR RHLIDVTEVF
101: RGIDFEKKLR FTKLGFYISL FILVVFRLTL SVVYSLTEDD DLLHLF
101: RGIDFEKKLR FTKLGFYISL FILVVFRLTL SVVYSLTEDD DLLHLF
001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
Arabidopsis Description
Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.