Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033120.1-P | Field mustard | endoplasmic reticulum, extracellular | 99.26 | 99.26 |
| CDY47431 | Canola | endoplasmic reticulum, extracellular | 99.26 | 99.26 |
| AT4G12090.1 | Thale cress | endoplasmic reticulum | 83.7 | 83.7 |
| CDY15996 | Canola | endoplasmic reticulum | 51.85 | 51.09 |
| CDX98068 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.11 | 50.37 |
| CDY21049 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 51.11 | 50.37 |
| CDY26562 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.11 | 50.37 |
| CDY30076 | Canola | endoplasmic reticulum, extracellular, vacuole | 51.11 | 50.37 |
| VIT_02s0025g05160.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 51.11 | 50.0 |
| CDY31264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.37 | 49.63 |
| Os06t0136500-01 | Rice | golgi, plasma membrane, vacuole | 30.37 | 49.4 |
| CDY45964 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.63 | 49.26 |
| KRH77425 | Soybean | plasma membrane | 47.41 | 48.12 |
| GSMUA_Achr3P11390_001 | Banana | plasma membrane | 35.56 | 47.52 |
| KRH28013 | Soybean | cytosol | 37.78 | 46.36 |
| Solyc06g060550.2.1 | Tomato | extracellular, plasma membrane, vacuole | 47.41 | 46.04 |
| KRH04043 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 45.99 |
| PGSC0003DMT400045318 | Potato | endoplasmic reticulum, extracellular, vacuole | 46.67 | 45.32 |
| KRH57311 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 45.93 | 45.26 |
| CDY32198 | Canola | plasma membrane | 37.04 | 44.25 |
| EER87801 | Sorghum | endoplasmic reticulum | 43.7 | 43.7 |
| GSMUA_Achr9P00470_001 | Banana | plasma membrane | 42.96 | 43.28 |
| PGSC0003DMT400032506 | Potato | endoplasmic reticulum, extracellular, vacuole | 43.7 | 42.45 |
| TraesCS7D01G071100.1 | Wheat | endoplasmic reticulum | 41.48 | 41.79 |
| TraesCS4A01G373700.1 | Wheat | endoplasmic reticulum | 41.48 | 41.79 |
| Solyc08g007510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 42.96 | 41.73 |
| TraesCS7A01G075500.1 | Wheat | endoplasmic reticulum | 40.74 | 41.04 |
| CDY52620 | Canola | endoplasmic reticulum | 42.22 | 39.04 |
| CDY50566 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.22 | 39.04 |
| CDY42135 | Canola | endoplasmic reticulum | 40.0 | 36.99 |
| CDY08445 | Canola | endoplasmic reticulum | 38.52 | 35.62 |
| GSMUA_Achr10P... | Banana | plasma membrane | 39.26 | 33.54 |
| CDY45478 | Canola | plasma membrane | 50.37 | 27.98 |
Protein Annotations
| EnsemblPlants:CDY04395 | EnsemblPlantsGene:GSBRNA2T00118389001 | GO:A0A078ER25 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016192 |
| InterPro:Cornichon | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 | PFAM:PF03311 | ProteinID:CDY04395 | ProteinID:CDY04395.1 |
| SEG:seg | SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI0004EDFB48 | MapMan:35.1 | : |
Description
BnaC02g28530D
Coordinates
chrLK031953:-:324687..325690
Molecular Weight (calculated)
15751.6 Da
IEP (calculated)
6.868
GRAVY (calculated)
0.436
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLLDWIIS FLFLVTLLII VIYQLTCLAD LEADHINPYD SSTKINRVIL PEFCLQGLLC VYYVLTGHWF MAILSLPHLF YNIRLYMKKE HLADVTEMHN
101: TNKGEQKKRL YKIGHITLCT FITSYWLIHS ALGDI
101: TNKGEQKKRL YKIGHITLCT FITSYWLIHS ALGDI
001: MGDLLDWIIS FLFLATLIII VIYQLTCLAD LEFDRINPYD VSSRINRMVL PEFGLQGLLC LYYILTGHWF MAVLSLPHLF YNIRLYMKRE HLADVTELYN
101: TNKWEQKKRV YKIGHIALSI FITTYWLIHS ALGDI
101: TNKWEQKKRV YKIGHIALSI FITTYWLIHS ALGDI
Arabidopsis Description
Protein cornichon homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ74]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.