Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034769.1-P | Field mustard | endoplasmic reticulum | 99.32 | 99.32 |
| CDY08445 | Canola | endoplasmic reticulum | 97.95 | 97.95 |
| AT3G12180.1 | Thale cress | endoplasmic reticulum | 92.47 | 92.47 |
| CDY52620 | Canola | endoplasmic reticulum | 85.62 | 85.62 |
| CDY50566 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 85.62 | 85.62 |
| VIT_08s0007g07860.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 54.11 | 60.31 |
| KRH67017 | Soybean | plasma membrane | 44.52 | 54.62 |
| GSMUA_Achr6P36290_001 | Banana | golgi, plasma membrane, vacuole | 48.63 | 47.65 |
| KRG95334 | Soybean | plasma membrane | 45.89 | 47.18 |
| EES16032 | Sorghum | endoplasmic reticulum | 47.26 | 46.31 |
| TraesCS5B01G108800.1 | Wheat | endoplasmic reticulum | 47.26 | 46.31 |
| TraesCS5A01G104500.1 | Wheat | endoplasmic reticulum | 47.26 | 46.31 |
| Os12t0506400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 46.58 | 45.64 |
| KRH33017 | Soybean | plasma membrane | 47.95 | 45.45 |
| TraesCS5D01G116400.1 | Wheat | endoplasmic reticulum | 47.26 | 45.1 |
| Zm00001d041744_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 42.47 | 44.29 |
| HORVU5Hr1G028480.1 | Barley | cytosol, vacuole | 39.04 | 43.51 |
| CDY31264 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.73 | 42.34 |
| CDY26562 | Canola | endoplasmic reticulum, extracellular, vacuole | 39.73 | 42.34 |
| CDY21049 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.04 | 41.61 |
| CDY15996 | Canola | endoplasmic reticulum | 39.04 | 41.61 |
| CDY45964 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.36 | 41.18 |
| KRH71885 | Soybean | plasma membrane | 47.95 | 41.18 |
| Zm00001d035235_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 47.26 | 41.07 |
| CDY30076 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.36 | 40.88 |
| CDX98068 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.36 | 40.88 |
| CDY32198 | Canola | plasma membrane | 31.51 | 40.71 |
| CDY04395 | Canola | endoplasmic reticulum, extracellular | 36.99 | 40.0 |
| CDY47431 | Canola | endoplasmic reticulum, extracellular | 36.99 | 40.0 |
| GSMUA_Achr5P22320_001 | Banana | plasma membrane | 49.32 | 38.92 |
| Solyc03g063970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 45.89 | 35.83 |
| CDY45478 | Canola | plasma membrane | 36.99 | 22.22 |
Protein Annotations
| EnsemblPlants:CDY42135 | EnsemblPlantsGene:GSBRNA2T00074316001 | GO:A0A078HUG2 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Cornichon | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 |
| PFAM:PF03311 | ProteinID:CDY42135 | ProteinID:CDY42135.1 | SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI0004EDE21C |
| UniProt:A0A078HUG2 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g40840DBnaC05g40840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUG2]
Coordinates
chrLK032516:+:61687..62891
Molecular Weight (calculated)
17344.5 Da
IEP (calculated)
6.082
GRAVY (calculated)
0.816
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWDLFLWIL SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLI LPEFILQGSL CVLFLITWHW VFFLAALPVT CYHAMLYKER RHLIDVTEVF
101: RGISFEKKLR FTKLGFYIFL FIMVVFRLTL SAVYSFTEDD DLLHLF
101: RGISFEKKLR FTKLGFYIFL FIMVVFRLTL SAVYSFTEDD DLLHLF
001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
Arabidopsis Description
Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.