Factsheet for GSMUA_Achr5P22320_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P36290_001	Banana	golgi, plasma membrane, vacuole	63.78	79.19
Os12t0506400-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	52.43	65.1
TraesCS5A01G104500.1	Wheat	endoplasmic reticulum	52.43	65.1
TraesCS5B01G108800.1	Wheat	endoplasmic reticulum	52.43	65.1
EES16032	Sorghum	endoplasmic reticulum	51.89	64.43
TraesCS5D01G116400.1	Wheat	endoplasmic reticulum	52.43	63.4
HORVU5Hr1G028480.1	Barley	cytosol, vacuole	44.32	62.6
VIT_08s0007g07860.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	43.24	61.07
Zm00001d041744_P001	Maize	endoplasmic reticulum, extracellular, vacuole	45.95	60.71
Zm00001d035235_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	50.81	55.95
KRH67017	Soybean	plasma membrane	33.51	52.1
CDY50566	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.0	50.68
GSMUA_Achr3P11390_001	Banana	plasma membrane	27.57	50.49
CDY52620	Canola	endoplasmic reticulum	39.46	50.0
KRH33017	Soybean	plasma membrane	41.62	50.0
CDY08445	Canola	endoplasmic reticulum	39.46	50.0
Bra034769.1-P	Field mustard	endoplasmic reticulum	38.92	49.32
CDY42135	Canola	endoplasmic reticulum	38.92	49.32
AT3G12180.1	Thale cress	endoplasmic reticulum	38.92	49.32
KRG95334	Soybean	plasma membrane	37.84	49.3
GSMUA_Achr9P00470_001	Banana	plasma membrane	35.68	49.25
KRH71885	Soybean	plasma membrane	39.46	42.94
GSMUA_Achr10P...	Banana	plasma membrane	32.97	38.61
Solyc03g063970.2.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	37.3	36.9

Protein Annotations

EnsemblPlants:GSMUA_Achr5P22320_001	EnsemblPlants:GSMUA_Achr5T22320_001	EnsemblPlantsGene:GSMUA_Achr5G22320_001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:Cornichon	PANTHER:PTHR12290	PANTHER:PTHR12290:SF18
PFAM:PF03311	SEG:seg	SignalP:SignalP-TM	SMART:SM01398	TMHMM:TMhelix	UniParc:UPI000295DF66
UniProt:M0T0Q7	MapMan:35.1	:	:	:	:

Description

Protein cornichon homolog 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G22320_001]

Coordinates

chr5:+:24404702..24407875

Molecular Weight (calculated)

21794.3 Da

IEP (calculated)

8.747

GRAVY (calculated)

0.615

Length

185 amino acids

Sequence
(BLAST)

001: MAWELFLWLL AFAAAISLIG FSAYQLICLS DLEFDYINPY DLSSRINAVV VPEFMVQGTL CILFLLTWHW FPFLLMAPIT YYHTKLYMKR KHLIDVTEIF
101: RLLNEEKKYR IIKLAFYCSI FIIVIYRKSG TVVISFRDKR IIILGQKSEH ALLKFGSFQL IFKLVTTAVL LLMEDDYRTM ESGIF

Best Arabidopsis Sequence Match ( AT3G12180.1 )
(BLAST)

001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF

Arabidopsis Description

Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.