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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G104500.1 Wheat endoplasmic reticulum 70.47 70.47
TraesCS5B01G108800.1 Wheat endoplasmic reticulum 70.47 70.47
TraesCS5D01G116400.1 Wheat endoplasmic reticulum 70.47 68.63
Os12t0506400-01 Rice endoplasmic reticulum, plasma membrane, vacuole 67.79 67.79
EES16032 Sorghum endoplasmic reticulum 67.11 67.11
GSMUA_Achr5P22320_001 Banana plasma membrane 79.19 63.78
Zm00001d041744_P001 Maize endoplasmic reticulum, extracellular, vacuole 59.06 62.86
VIT_08s0007g07860.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.36 61.83
HORVU5Hr1G028480.1 Barley cytosol, vacuole 54.36 61.83
Zm00001d035235_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 65.77 58.33
CDY50566 Canola endoplasmic reticulum, extracellular, plasma membrane 50.34 51.37
KRH67017 Soybean plasma membrane 39.6 49.58
GSMUA_Achr3P11390_001 Banana plasma membrane 33.56 49.51
KRH33017 Soybean plasma membrane 51.01 49.35
CDY52620 Canola endoplasmic reticulum 48.32 49.32
CDY08445 Canola endoplasmic reticulum 48.32 49.32
AT3G12180.1 Thale cress endoplasmic reticulum 48.32 49.32
Bra034769.1-P Field mustard endoplasmic reticulum 47.65 48.63
CDY42135 Canola endoplasmic reticulum 47.65 48.63
GSMUA_Achr9P00470_001 Banana plasma membrane 43.62 48.51
KRG95334 Soybean plasma membrane 44.97 47.18
KRH71885 Soybean plasma membrane 48.32 42.35
GSMUA_Achr10P... Banana plasma membrane 40.94 38.61
Solyc03g063970.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 47.65 37.97
Protein Annotations
EnsemblPlants:GSMUA_Achr6P36290_001EnsemblPlants:GSMUA_Achr6T36290_001EnsemblPlantsGene:GSMUA_Achr6G36290_001GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016192InterPro:CornichonPANTHER:PTHR12290PANTHER:PTHR12290:SF18
PFAM:PF03311SEG:segSMART:SM01398TMHMM:TMhelixUniParc:UPI000294D7E2UniProt:M0TD71
MapMan:35.1:::::
Description
Protein cornichon homolog 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G36290_001]
Coordinates
chr6:-:34336439..34342754
Molecular Weight (calculated)
17332.7 Da
IEP (calculated)
5.099
GRAVY (calculated)
0.879
Length
149 amino acids
Sequence
(BLAST)
001: MAWELLLWLL AFAAVIALIG LSAYQLICLS DLEFDYINPY DSSSRINAVV IPEFLVQGIL CILFLLTWHW FPFLIMAPIT YYHIKLYMKG KHLIDVTEIF
101: RLLNGEKKYR VIKLAFYCSI FIVVIYRLVT TSVLLLIEED DQALESGIF
Best Arabidopsis Sequence Match ( AT3G12180.1 )
(BLAST)
001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
Arabidopsis Description
Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.