Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0506400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 76.79 | 86.58 |
| TraesCS5B01G108800.1 | Wheat | endoplasmic reticulum | 76.19 | 85.91 |
| TraesCS5A01G104500.1 | Wheat | endoplasmic reticulum | 76.19 | 85.91 |
| TraesCS5D01G116400.1 | Wheat | endoplasmic reticulum | 76.19 | 83.66 |
| Zm00001d041744_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 65.48 | 78.57 |
| HORVU5Hr1G028480.1 | Barley | cytosol, vacuole | 54.76 | 70.23 |
| GSMUA_Achr6P36290_001 | Banana | golgi, plasma membrane, vacuole | 58.33 | 65.77 |
| VIT_08s0007g07860.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 44.05 | 56.49 |
| GSMUA_Achr5P22320_001 | Banana | plasma membrane | 55.95 | 50.81 |
| CDY08445 | Canola | endoplasmic reticulum | 42.26 | 48.63 |
| Bra034769.1-P | Field mustard | endoplasmic reticulum | 41.67 | 47.95 |
| CDY52620 | Canola | endoplasmic reticulum | 41.67 | 47.95 |
| AT3G12180.1 | Thale cress | endoplasmic reticulum | 41.67 | 47.95 |
| KRH67017 | Soybean | plasma membrane | 33.93 | 47.9 |
| CDY50566 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 41.07 | 47.26 |
| CDY42135 | Canola | endoplasmic reticulum | 41.07 | 47.26 |
| KRH33017 | Soybean | plasma membrane | 42.86 | 46.75 |
| KRG95334 | Soybean | plasma membrane | 37.5 | 44.37 |
| KRH71885 | Soybean | plasma membrane | 41.67 | 41.18 |
| Solyc03g063970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 41.67 | 37.43 |
Protein Annotations
| EnsemblPlants:Zm00001d035235_P001 | EnsemblPlants:Zm00001d035235_T001 | EnsemblPlantsGene:Zm00001d035235 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Cornichon | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 |
| PFAM:PF03311 | ProteinID:AQK78558.1 | SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI000842DF02 | UniProt:A0A1D6LF38 |
| MapMan:35.1 | : | : | : | : | : |
Description
Protein cornichon homolog 1
Coordinates
chr6:+:16089925..16093478
Molecular Weight (calculated)
19449.3 Da
IEP (calculated)
6.338
GRAVY (calculated)
0.795
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVELILWLF SFVSVMVLIG LTAYQASLTT LLHLLIVHPV TASALICLSD LEYDYINPYD SSSRINAVVL IEYSLQGALC ASFLLTLHWF PFLVMTPVTY
101: YHVKLYLARK HLVDVTEIFR QLSDEKKYRM IKLAFYFCLF IITIYRLVMT AVMLFIDEDI NLAETRSI
101: YHVKLYLARK HLVDVTEIFR QLSDEKKYRM IKLAFYFCLF IITIYRLVMT AVMLFIDEDI NLAETRSI
001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
Arabidopsis Description
Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.