Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH67017 | Soybean | plasma membrane | 73.24 | 87.39 |
| KRH33017 | Soybean | plasma membrane | 66.9 | 61.69 |
| VIT_08s0007g07860.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 52.82 | 57.25 |
| KRH71885 | Soybean | plasma membrane | 64.79 | 54.12 |
| CDY08445 | Canola | endoplasmic reticulum | 47.89 | 46.58 |
| Bra034769.1-P | Field mustard | endoplasmic reticulum | 47.18 | 45.89 |
| CDY42135 | Canola | endoplasmic reticulum | 47.18 | 45.89 |
| HORVU5Hr1G028480.1 | Barley | cytosol, vacuole | 42.25 | 45.8 |
| GSMUA_Achr6P36290_001 | Banana | golgi, plasma membrane, vacuole | 47.18 | 44.97 |
| AT3G12180.1 | Thale cress | endoplasmic reticulum | 45.77 | 44.52 |
| CDY52620 | Canola | endoplasmic reticulum | 45.77 | 44.52 |
| CDY50566 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.77 | 44.52 |
| TraesCS5B01G108800.1 | Wheat | endoplasmic reticulum | 46.48 | 44.3 |
| TraesCS5A01G104500.1 | Wheat | endoplasmic reticulum | 46.48 | 44.3 |
| KRH28013 | Soybean | cytosol | 33.8 | 43.64 |
| TraesCS5D01G116400.1 | Wheat | endoplasmic reticulum | 46.48 | 43.14 |
| KRH04043 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 40.85 | 42.34 |
| EES16032 | Sorghum | endoplasmic reticulum | 44.37 | 42.28 |
| Os12t0506400-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 44.37 | 42.28 |
| Zm00001d041744_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 41.55 | 42.14 |
| KRH77425 | Soybean | plasma membrane | 39.44 | 42.11 |
| KRH57311 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 40.14 | 41.61 |
| KRH00566 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 37.32 | 38.97 |
| GSMUA_Achr5P22320_001 | Banana | plasma membrane | 49.3 | 37.84 |
| KRH40600 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 35.92 | 37.5 |
| Zm00001d035235_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 44.37 | 37.5 |
| Solyc03g063970.2.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 39.44 | 29.95 |
Protein Annotations
| EMBL:ACUP02012102 | EnsemblPlants:KRG95334 | EnsemblPlantsGene:GLYMA_19G144000 | EntrezGene:100527262 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Cornichon | PANTHER:PTHR12290 |
| PANTHER:PTHR12290:SF11 | PFAM:PF03311 | ProteinID:KRG95333.1 | ProteinID:KRG95334 | ProteinID:KRG95334.1 | SMART:SM01398 |
| TMHMM:TMhelix | UniParc:UPI0001B641B0 | UniProt:A0A0R0EME6 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr19:-:40525401..40529448
Molecular Weight (calculated)
16757.0 Da
IEP (calculated)
5.592
GRAVY (calculated)
0.843
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDLFFWFV LCLPLNFAFL ASTFYQVLML SDLEADFINP YDAASRINYF IVPEFIGQGL LCAFCLLTGH WIMFLITVPV TCYHVMLYMK RKHLIDVTEV
101: FRLLNAEKKF RIAKIAYYLT IIFISIFRLV LMLVYYLDSE DE
101: FRLLNAEKKF RIAKIAYYLT IIFISIFRLV LMLVYYLDSE DE
001: MAWDLFLWIV SFFVSLALVA SVFYQVICLT DLEADYLNPF ETSTRINRLV IPEFILQGSL CLLFLLTWHW VFFLVAVPVT VYHAMLYKER RYLIDVTEVF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
101: RGISFEKKLR YTKLGFYVFL FIMVVFRLTL SAVYSFTEDD DLLHLF
Arabidopsis Description
Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7D7]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.