Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 6
- plasma membrane 6
- endoplasmic reticulum 6
- vacuole 5
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47431 | Canola | endoplasmic reticulum, extracellular | 100.0 | 100.0 |
| CDY04395 | Canola | endoplasmic reticulum, extracellular | 99.26 | 99.26 |
| AT4G12090.1 | Thale cress | endoplasmic reticulum | 84.44 | 84.44 |
| Bra019762.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 51.11 | 50.37 |
| VIT_02s0025g05160.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 51.11 | 50.0 |
| Os06t0136500-01 | Rice | golgi, plasma membrane, vacuole | 30.37 | 49.4 |
| KRH77425 | Soybean | plasma membrane | 47.41 | 48.12 |
| GSMUA_Achr3P11390_001 | Banana | plasma membrane | 35.56 | 47.52 |
| KRH28013 | Soybean | cytosol | 37.78 | 46.36 |
| Solyc06g060550.2.1 | Tomato | extracellular, plasma membrane, vacuole | 47.41 | 46.04 |
| Bra039259.1-P | Field mustard | endoplasmic reticulum | 38.52 | 46.02 |
| KRH04043 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.67 | 45.99 |
| PGSC0003DMT400045318 | Potato | endoplasmic reticulum, extracellular, vacuole | 46.67 | 45.32 |
| KRH57311 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 45.93 | 45.26 |
| EER87801 | Sorghum | endoplasmic reticulum | 43.7 | 43.7 |
| GSMUA_Achr9P00470_001 | Banana | plasma membrane | 42.96 | 43.28 |
| PGSC0003DMT400032506 | Potato | endoplasmic reticulum, extracellular, vacuole | 43.7 | 42.45 |
| TraesCS4A01G373700.1 | Wheat | endoplasmic reticulum | 41.48 | 41.79 |
| TraesCS7D01G071100.1 | Wheat | endoplasmic reticulum | 41.48 | 41.79 |
| Solyc08g007510.2.1 | Tomato | extracellular, plasma membrane, vacuole | 42.96 | 41.73 |
| TraesCS7A01G075500.1 | Wheat | endoplasmic reticulum | 40.74 | 41.04 |
| Bra034769.1-P | Field mustard | endoplasmic reticulum | 40.0 | 36.99 |
| GSMUA_Achr10P... | Banana | plasma membrane | 39.26 | 33.54 |
| Bra016774.1-P | Field mustard | plasma membrane | 42.22 | 32.95 |
| Bra027009.1-P | Field mustard | plasma membrane | 49.63 | 32.52 |
Protein Annotations
| EnsemblPlants:Bra033120.1 | EnsemblPlants:Bra033120.1-P | EnsemblPlantsGene:Bra033120 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Cornichon | PANTHER:PTHR12290 | PANTHER:PTHR12290:SF18 |
| PFAM:PF03311 | SEG:seg | SMART:SM01398 | TMHMM:TMhelix | UniParc:UPI00025471E2 | UniProt:M4EWD6 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT4G12090 (E=1e-057) | cornichon family protein
Coordinates
chrA02:+:16671098..16671958
Molecular Weight (calculated)
15721.5 Da
IEP (calculated)
6.868
GRAVY (calculated)
0.455
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLLDWIIS FLFLVTLLII VIYQLTCLAD LEADHINPYD SSTKINRVIL PEFCLQGLLC VYYVLTGHWF MAILSLPHLF YNIRLYMKKE HLADVTEMHN
101: TNKGEQKKRL YKIGHIALCT FITSYWLIHS ALGDI
101: TNKGEQKKRL YKIGHIALCT FITSYWLIHS ALGDI
001: MGDLLDWIIS FLFLATLIII VIYQLTCLAD LEFDRINPYD VSSRINRMVL PEFGLQGLLC LYYILTGHWF MAVLSLPHLF YNIRLYMKRE HLADVTELYN
101: TNKWEQKKRV YKIGHIALSI FITTYWLIHS ALGDI
101: TNKWEQKKRV YKIGHIALSI FITTYWLIHS ALGDI
Arabidopsis Description
Protein cornichon homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ74]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.