Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 2
- plasma membrane 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21197 | Soybean | cytosol, peroxisome, plasma membrane | 97.07 | 97.07 |
| KRH45251 | Soybean | extracellular | 26.01 | 78.02 |
| KRH59036 | Soybean | plasma membrane | 76.92 | 77.78 |
| KRH42926 | Soybean | plasma membrane | 75.82 | 75.55 |
| VIT_10s0003g01830.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 74.36 | 71.99 |
| KRH59035 | Soybean | plasma membrane | 70.33 | 70.85 |
| PGSC0003DMT400071510 | Potato | plasma membrane | 71.79 | 70.76 |
| Solyc03g005980.2.1 | Tomato | plasma membrane | 70.7 | 69.68 |
| CDX78905 | Canola | cytosol, peroxisome, plasma membrane | 72.16 | 66.33 |
| KRH42923 | Soybean | extracellular | 65.57 | 66.05 |
| Bra013361.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.43 | 65.66 |
| CDX98596 | Canola | cytosol, peroxisome, plasma membrane | 71.43 | 65.44 |
| Solyc02g071920.2.1 | Tomato | plasma membrane | 69.23 | 65.17 |
| PGSC0003DMT400073246 | Potato | plasma membrane | 69.23 | 65.17 |
| CDY01565 | Canola | cytosol, peroxisome, plasma membrane | 71.06 | 65.1 |
| Bra012567.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.06 | 65.1 |
| CDX99411 | Canola | cytosol, peroxisome, plasma membrane | 70.7 | 64.98 |
| AT4G18910.1 | Thale cress | golgi, peroxisome, vacuole | 69.6 | 64.63 |
| AT4G19030.1 | Thale cress | plasma membrane | 66.3 | 61.15 |
| KRH50367 | Soybean | plasma membrane | 49.08 | 51.15 |
| KRH15118 | Soybean | plasma membrane | 47.99 | 50.19 |
| TraesCS7A01G355000.1 | Wheat | peroxisome | 50.92 | 49.82 |
| TraesCS7B01G272700.1 | Wheat | plasma membrane | 50.92 | 49.82 |
| TraesCS7D01G367800.1 | Wheat | golgi, peroxisome, plasma membrane | 50.55 | 49.46 |
| KRH73019 | Soybean | cytosol, peroxisome, plasma membrane | 46.89 | 49.04 |
| KXG20157 | Sorghum | golgi, nucleus, plasma membrane | 49.82 | 46.74 |
| Os06t0552700-01 | Rice | cytosol, peroxisome, plastid | 45.42 | 45.42 |
| KRH16737 | Soybean | cytosol, peroxisome, vacuole | 44.69 | 45.19 |
| KRH15764 | Soybean | endoplasmic reticulum, extracellular, plastid, vacuole | 16.48 | 43.27 |
| KRH18910 | Soybean | plasma membrane | 38.1 | 41.43 |
| KRH47396 | Soybean | plasma membrane | 27.11 | 40.44 |
| KRH47366 | Soybean | cytosol, plasma membrane, vacuole | 31.14 | 39.17 |
| Zm00001d046303_P001 | Maize | golgi, peroxisome, plasma membrane | 45.05 | 38.8 |
| KRH47369 | Soybean | mitochondrion, plastid | 26.01 | 38.59 |
| KRH35064 | Soybean | plastid | 41.03 | 37.46 |
| KRG91709 | Soybean | plastid | 34.07 | 36.47 |
| KRH09661 | Soybean | plasma membrane, plastid | 40.29 | 36.18 |
| KRH44534 | Soybean | plastid | 38.83 | 34.64 |
| KRH01175 | Soybean | plastid | 37.0 | 34.24 |
| KRH40096 | Soybean | plastid | 36.26 | 33.79 |
| HORVU7Hr1G088900.1 | Barley | cytosol, golgi, plasma membrane | 26.01 | 33.65 |
| KRH32130 | Soybean | plasma membrane | 33.7 | 33.33 |
| KRH71310 | Soybean | plasma membrane | 33.7 | 31.08 |
| GSMUA_Achr4P10230_001 | Banana | plastid | 23.08 | 20.06 |
Protein Annotations
| Gene3D:1.20.1080.10 | EntrezGene:100786924 | MapMan:24.3.1.1 | EMBL:ACUP02009177 | InterPro:Aquaporin-like | InterPro:Aquaporin_transptr |
| EnsemblPlantsGene:GLYMA_15G087300 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0006833 | GO:GO:0008150 | GO:GO:0015250 | GO:GO:0015267 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 | GO:GO:0055085 | UniProt:I1MEW7 | InterPro:IPR023271 |
| EnsemblPlants:KRH11076 | ProteinID:KRH11076 | ProteinID:KRH11076.1 | InterPro:MIP | InterPro:MIP_CS | PFAM:PF00230 |
| PRINTS:PR00783 | ScanProsite:PS00221 | PANTHER:PTHR19139 | PANTHER:PTHR19139:SF189 | SUPFAM:SSF81338 | TIGRFAMs:TIGR00861 |
| TMHMM:TMhelix | UniParc:UPI0001B379BB | : | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:6723421..6725900
Molecular Weight (calculated)
28838.9 Da
IEP (calculated)
8.079
GRAVY (calculated)
0.414
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVVADNSAN NGSHQVVLNV NGDASKKCDD SSNQDCVPLL QKLVAEVVGT YFLIFAGCAS VVVNLDKDKV VTQPGISIVW GLTVMVLVYS VGHISGAHFN
101: PAVTIAHATT KRFPLKQVPA YVIAQVVGAT LASGTLRLIF NGKSDHFTGT LPGGSDLQSF VVEFIITFYL MFVISGVATD NRAIGELAGL AVGSTVLLNV
201: MFAGPITGAS MNPARSLGPA IVHNEYKGIW IYLVSPTLGA VAGTWAYNFI RYTNKPVREI TKSASFLKGG EAE
101: PAVTIAHATT KRFPLKQVPA YVIAQVVGAT LASGTLRLIF NGKSDHFTGT LPGGSDLQSF VVEFIITFYL MFVISGVATD NRAIGELAGL AVGSTVLLNV
201: MFAGPITGAS MNPARSLGPA IVHNEYKGIW IYLVSPTLGA VAGTWAYNFI RYTNKPVREI TKSASFLKGG EAE
001: MAEISGNGGD ARDGAVVVNL KEEDEQQQQQ QAIHKPLKKQ DSLLSISVPF LQKLMAEVLG TYFLIFAGCA AVAVNTQHDK AVTLPGIAIV WGLTVMVLVY
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
101: SLGHISGAHF NPAVTIAFAS CGRFPLKQVP AYVISQVIGS TLAAATLRLL FGLDQDVCSG KHDVFVGTLP SGSNLQSFVI EFIITFYLMF VISGVATDNR
201: AIGELAGLAV GSTVLLNVII AGPVSGASMN PGRSLGPAMV YSCYRGLWIY IVSPIVGAVS GAWVYNMVRY TDKPLREITK SGSFLKTVRN GSSR
Arabidopsis Description
NIP1-2Aquaporin NIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFP7]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.