CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol, plasma membrane

Predictor Summary:

nucleus 1
plastid 1
endoplasmic reticulum 2
golgi 2
extracellular 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g096340.1.1	Tomato	plasma membrane	75.85	82.21
PGSC0003DMT400075533	Potato	endoplasmic reticulum, plasma membrane, vacuole	79.88	80.62
VIT_04s0069g00770.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane, plastid	80.19	79.94
AT4G31600.1	Thale cress	cytosol, plasma membrane, vacuole	79.26	79.26
CDY65657	Canola	cytosol, plasma membrane, vacuole	78.02	78.02
CDY57885	Canola	endoplasmic reticulum, plasma membrane, vacuole	78.02	78.02
Os06t0188100-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	74.3	74.3
Zm00001d000026_P001	Maize	plasma membrane	58.2	73.44
KRH61951	Soybean	endoplasmic reticulum, extracellular, plasma membrane	34.98	73.38
EER89355	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	73.37	73.37
Zm00001d045074_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	73.06	73.06
Zm00001d025454_P001	Maize	plasma membrane	57.89	73.05
HORVU5Hr1G049270.1	Barley	endoplasmic reticulum, plasma membrane, plastid	71.52	72.87
TraesCS7B01G057100.1	Wheat	plasma membrane	72.76	72.76
TraesCS7A01G153000.1	Wheat	plasma membrane	72.76	72.76
TraesCSU01G104100.1	Wheat	plasma membrane	72.45	72.45
HORVU7Hr1G031350.2	Barley	plasma membrane	72.45	72.45
HORVU5Hr1G093740.1	Barley	endoplasmic reticulum, extracellular, plastid	27.86	66.18
Bra010229.1-P	Field mustard	plasma membrane	78.02	64.12
Zm00001d044684_P001	Maize	extracellular, plasma membrane, vacuole	42.41	63.13
GSMUA_Achr6P03950_001	Banana	mitochondrion, plasma membrane, plastid	77.09	63.04
Zm00001d047943_P001	Maize	plasma membrane	24.46	51.3
KRH05178	Soybean	plastid	27.55	25.8
KRH54916	Soybean	cytosol, peroxisome, plasma membrane	26.93	25.66
KRH15879	Soybean	plasma membrane, plastid	27.24	25.51
KRH52423	Soybean	peroxisome	27.24	25.36
KRH61757	Soybean	plasma membrane	18.89	25.1

Protein Annotations

EntrezGene:100777622	MapMan:24.2.1.1.8	EMBL:ACUP02003425	EMBL:BT095406	UniProt:C6TCV8	EnsemblPlantsGene:GLYMA_06G077800
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015165
GO:GO:0016020	GO:GO:0016021	GO:GO:0034219	GO:GO:0090481	EnsemblPlants:KRH52610	ProteinID:KRH52610
ProteinID:KRH52610.1	ProteinID:KRH52611.1	PFAM:PF03151	PANTHER:PTHR44748	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix
UniParc:UPI0001B16350	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:6023842..6027245

Molecular Weight (calculated)

35131.7 Da

IEP (calculated)

9.834

GRAVY (calculated)

0.785

Length

323 amino acids

Sequence
(BLAST)

001: MEIRADADTS SFSSLFAAVS YGFTSMAMVF INKAVLMQYA YSMTLLTLQQ LVTTLLIHFG RKTGYTKARE LDMTTAKRLL PLSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLVAG CFSGKGKPTT QVALSVILTA AGVLIAALGD FSFDLFGYSM AFVSVFFQTM YLVLVEKSGA EDGLSSLEIM FYNSFLSLPF
201: LMFLIVATGE FPNSLSVLFA KSYSFSFLVI LILSLVMGII LNFTMFLCTI VNSALTTTIV GVLKGVVSTT FGFFLLGGVQ VHALNVSGLV INTAGGVWYS
301: YAKYHQRKSK AVKLVPDVEA HRK

Best Arabidopsis Sequence Match ( AT4G31600.1 )
(BLAST)

001: MEVQAEMEPT SSISLVAAVS YGIASMAMVF INKAVIMQYP HSMTVLTLQQ LATSLLIHFG RRMGYTRAKG IDMATAKKLL PVSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLISG VLFGKGKPTT QVALSVLLTA AGCVIAALGD FSFDLFGYGL ALTSVFFQTM YLVLVEKSGA EDGLSSIEIM FYNSFLSLPF
201: LSILIIVTGE FPNSLSLLLA KCSYLPFLVI LILSLVMGIV LNFTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVE VHALNVSGLV VNTAGGVWYS
301: YAKYRQKKAK PAKLMSDLEA HKK

Arabidopsis Description

UTR7UDP-galactose/UDP-glucose transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94B65]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.