CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	endoplasmic reticulum, nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65657	Canola	cytosol, plasma membrane, vacuole	99.07	99.07
AT4G31600.1	Thale cress	cytosol, plasma membrane, vacuole	95.67	95.67
Solyc12g096340.1.1	Tomato	plasma membrane	74.3	80.54
PGSC0003DMT400075533	Potato	endoplasmic reticulum, plasma membrane, vacuole	78.33	79.06
VIT_04s0069g00770.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane, plastid	79.26	79.01
KRH52610	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	78.02	78.02
Zm00001d000026_P001	Maize	plasma membrane	58.82	74.22
Zm00001d025454_P001	Maize	plasma membrane	58.51	73.83
EER89355	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	73.68	73.68
Zm00001d045074_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	73.37	73.37
Os06t0188100-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	73.37	73.37
HORVU5Hr1G049270.1	Barley	endoplasmic reticulum, plasma membrane, plastid	70.9	72.24
TraesCS7B01G057100.1	Wheat	plasma membrane	72.14	72.14
TraesCSU01G104100.1	Wheat	plasma membrane	72.14	72.14
TraesCS7A01G153000.1	Wheat	plasma membrane	71.83	71.83
HORVU7Hr1G031350.2	Barley	plasma membrane	71.52	71.52
HORVU5Hr1G093740.1	Barley	endoplasmic reticulum, extracellular, plastid	28.48	67.65
KRH61951	Soybean	endoplasmic reticulum, extracellular, plasma membrane	30.65	64.29
Zm00001d044684_P001	Maize	extracellular, plasma membrane, vacuole	42.72	63.59
GSMUA_Achr6P03950_001	Banana	mitochondrion, plasma membrane, plastid	75.85	62.03
Zm00001d047943_P001	Maize	plasma membrane	23.22	48.7
CDY61397	Canola	plasma membrane, plastid	26.32	28.91
CDY13477	Canola	peroxisome	27.86	26.24
CDY64678	Canola	plasma membrane	22.29	25.26
CDY32055	Canola	plasma membrane	21.98	24.91
CDX72350	Canola	plasma membrane	28.17	23.51
CDY53698	Canola	plasma membrane	27.24	22.22

Protein Annotations

EnsemblPlants:CDY57885	EnsemblPlantsGene:GSBRNA2T00022788001	GO:A0A078J5A3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44748	PFAM:PF03151	ProteinID:CDY57885	ProteinID:CDY57885.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0004EEE701	UniProt:A0A078J5A3	MapMan:24.2.1.1.8	:	:

Description

BnaC03g77290DBnaC03g77290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5A3]

Coordinates

chrLK033613:-:46513..48466

Molecular Weight (calculated)

34751.6 Da

IEP (calculated)

9.629

GRAVY (calculated)

0.779

Length

323 amino acids

Sequence
(BLAST)

001: MEVQPEMEPT SSISLIAAVS YGIVSMAMVF INKAVIMQYP HSMTVLTLQQ LATSLFIHCG RRMGYTRARG IDLATAKKLL PVSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLIAG YLFGKGKPTT QVALSVLLTA AGCVIAALGD FSFDLFGYGL ALTSVFFQTM YLVLVEKSGA EDGLSSIEIM FYNSFLSLPF
201: LSFLIIVTGE FPNSLSLLLA KCSYLPFLVM LVLSLVMGIV LNFTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVE VHALNVSGLV VNTAGGVWYS
301: YAKYRQKKAK PAKTLSDLEA HKK

Best Arabidopsis Sequence Match ( AT4G31600.1 )
(BLAST)

001: MEVQAEMEPT SSISLVAAVS YGIASMAMVF INKAVIMQYP HSMTVLTLQQ LATSLLIHFG RRMGYTRAKG IDMATAKKLL PVSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLISG VLFGKGKPTT QVALSVLLTA AGCVIAALGD FSFDLFGYGL ALTSVFFQTM YLVLVEKSGA EDGLSSIEIM FYNSFLSLPF
201: LSILIIVTGE FPNSLSLLLA KCSYLPFLVI LILSLVMGIV LNFTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVE VHALNVSGLV VNTAGGVWYS
301: YAKYRQKKAK PAKLMSDLEA HKK

Arabidopsis Description

UTR7UDP-galactose/UDP-glucose transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94B65]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.