CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61397	Canola	plasma membrane, plastid	72.73	97.96
Bra040073.1-P	Field mustard	peroxisome	81.31	93.6
CDY13477	Canola	peroxisome	72.47	83.67
AT4G32272.2	Thale cress	cytosol, peroxisome, plasma membrane	72.47	79.94
GSMUA_Achr4P09910_001	Banana	plasma membrane	57.32	73.23
CDX72350	Canola	plasma membrane	68.43	70.03
TraesCS6A01G229900.2	Wheat	plasma membrane	58.33	67.94
Os02t0614100-01	Rice	plasma membrane	59.34	67.92
HORVU6Hr1G056950.2	Barley	plasma membrane	58.08	67.65
TraesCS6B01G251900.2	Wheat	plasma membrane	58.08	67.65
TraesCS6D01G205100.1	Wheat	plasma membrane	58.08	67.65
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	59.34	67.34
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	58.33	66.38
CDY64678	Canola	plasma membrane	39.65	55.09
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	27.02	54.59
CDY32055	Canola	plasma membrane	39.14	54.39
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	58.59	53.95
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	23.23	46.23
CDY57885	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.22	27.24
CDY65657	Canola	cytosol, plasma membrane, vacuole	22.22	27.24

Protein Annotations

EnsemblPlants:CDY53698	EnsemblPlantsGene:GSBRNA2T00011255001	GO:A0A078IXE8	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	ProteinID:CDY53698	ProteinID:CDY53698.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDE413	UniProt:A0A078IXE8	MapMan:24.2.1.1.8	:

Description

BnaC03g67150DBnaC03g67150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXE8]

Coordinates

chrLK033229:+:7532..10804

Molecular Weight (calculated)

43680.7 Da

IEP (calculated)

9.180

GRAVY (calculated)

0.443

Length

396 amino acids

Sequence
(BLAST)

001: MNFFFFQNLN IRIRSEITEL ELKIPEPDPK YKNTRAGSIS LYRNTRKSEI PDPNPNEVVT DPPLAGENDT SDGKGVDDRL FKGSAMTKRG AYAALSYMAC
101: AVMLVLFNKA ALSSYHFPCV NVITLFQMVS STFFLYSLRR KKIISFIAAD SFSGSGSTSA FVPLKTLFHT LPLSIAYLMY MLASMASVRG VNVPMYTTLR
201: RTTVAFTMVI EYMLTGQRYT QSIIGSVGVI IFGAFFAGAR DLSFDFYGYG VVFLANITTA VYLATIARIG KSSGLNSFGL MWCNGIICGP ILMIWTSMSG
301: DLEKTISFPY LFSPGFMAVL LCSCVLAFFL NYSIFLNTTL NSALTQTICG NMKDLFTVGL GWMVFGGLPF DLMNVIGQLL GFLGSGLYAY YKIIGK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.