Factsheet for GSMUA_Achr6P36410_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular, cytosol

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066980.2.1	Tomato	extracellular	40.7	69.83
PGSC0003DMT400074812	Potato	plasma membrane	48.24	45.28
GSMUA_Achr4P09910_001	Banana	plasma membrane	55.78	35.81
CDY61397	Canola	plasma membrane, plastid	47.24	31.97
TraesCS6D01G205100.1	Wheat	plasma membrane	49.25	28.82
HORVU6Hr1G056950.2	Barley	plasma membrane	48.74	28.53
TraesCS6A01G229900.2	Wheat	plasma membrane	48.74	28.53
VIT_04s0008g05570.t01	Wine grape	plasma membrane, plastid	48.74	28.53
TraesCS6B01G251900.2	Wheat	plasma membrane	48.74	28.53
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	47.74	27.3
KRH05178	Soybean	plastid	47.24	27.25
CDY13477	Canola	peroxisome	46.73	27.11
Bra023959.1-P	Field mustard	peroxisome	46.73	27.11
VIT_11s0016g05710.t01	Wine grape	peroxisome	46.23	27.06
Bra040073.1-P	Field mustard	peroxisome	46.73	27.03
KRH15879	Soybean	plasma membrane, plastid	46.73	26.96
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	47.24	26.93
Os02t0614100-01	Rice	plasma membrane	46.73	26.88
KRH52423	Soybean	peroxisome	45.73	26.22
PGSC0003DMT400079415	Potato	cytosol, peroxisome, plasma membrane	43.72	25.97
Solyc07g007990.2.1	Tomato	plasma membrane	43.22	25.52
Solyc01g009830.2.1	Tomato	cytosol, peroxisome, plasma membrane	42.71	25.15
AT4G32272.2	Thale cress	cytosol, peroxisome, plasma membrane	44.22	24.51
KRH61757	Soybean	plasma membrane	29.65	24.28
AT2G14695.1	Thale cress	peroxisome	41.71	23.99
KRH54916	Soybean	cytosol, peroxisome, plasma membrane	40.7	23.89
CDX72350	Canola	plasma membrane	46.23	23.77
CDY53698	Canola	plasma membrane	46.23	23.23
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	48.24	22.33
CDY64678	Canola	plasma membrane	30.65	21.4
CDY32055	Canola	plasma membrane	30.15	21.05
GSMUA_Achr6P03950_001	Banana	mitochondrion, plasma membrane, plastid	22.11	11.14
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	2.01	2.04
Solyc08g066970.2.1	Tomato	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr6P36410_001	EnsemblPlants:GSMUA_Achr6T36410_001	EnsemblPlantsGene:GSMUA_Achr6G36410_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR44680	SEG:seg	TMHMM:TMhelix	UniParc:UPI000295D59E	UniProt:M0TD83	MapMan:24.2.1.1.8

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G36410_001]

Coordinates

chr6:-:34398457..34399603

Molecular Weight (calculated)

22024.1 Da

IEP (calculated)

7.696

GRAVY (calculated)

0.481

Length

199 amino acids

Sequence
(BLAST)

001: MTTAIYLASV NRVGRIFSGL NSFGLMWCNG IVCGPILLLW TYFRGDLGLT MNFPYLHSVG FQVGLSVCCD ATFLYTGIFF NTTLNSALTQ TMCGKLKDLF
101: TIGLGWLLFG GLPFDVLSVT GQILGFVGSG FYAYCKIKGK YNFIQLSQIY DRISHRWGPG FHSYLTCEME LALGGASSPP GMNFLWMLHT PLDDPYACM

Best Arabidopsis Sequence Match ( AT4G32272.2 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VLVFSRIRFS GFRSSFMLVL FNKAALSSYD FPCVNVITLF QMVSSSLFLY
101: ALRRRKIISF TAADSFSIDS ASTFVPVKTL FHTLPLAIAY LLYMLASMAS VRGVNVPMYT TLRRTTVAFT MVIEYMLTGQ RYTRSIIGSV GIILLGAFFA
201: GARDLSFDFY GYGVVFLANI STAVYLATIA RTGKSSGLNS FGLMWSNGII CGPILMIWTF ICGDLEKTIN FPHLLTPGFM VVLLCSCVLA FVLNYCIFLN
301: TTLNSALTQT ICGNMKDLFT VGLGWMLFGG LPFDLMNVIG QLFGFFGSGL YAYYKIIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.