Factsheet for VIT_04s0008g05570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	golgi
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400074812	Potato	plasma membrane	51.18	82.08
Solyc08g066980.2.1	Tomato	extracellular	27.94	81.9
KRH05178	Soybean	plastid	77.35	76.23
KRH15879	Soybean	plasma membrane, plastid	76.47	75.36
GSMUA_Achr4P09910_001	Banana	plasma membrane	67.35	73.87
KRH52423	Soybean	peroxisome	73.53	72.05
Bra040073.1-P	Field mustard	peroxisome	71.76	70.93
VIT_11s0016g05710.t01	Wine grape	peroxisome	69.41	69.41
Bra023959.1-P	Field mustard	peroxisome	70.0	69.39
KRH61757	Soybean	plasma membrane	48.53	67.9
HORVU6Hr1G056950.2	Barley	plasma membrane	65.59	65.59
TraesCS6D01G205100.1	Wheat	plasma membrane	65.29	65.29
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	66.76	65.23
Solyc08g066970.2.1	Tomato	plastid	36.18	65.08
TraesCS6A01G229900.2	Wheat	plasma membrane	65.0	65.0
TraesCS6B01G251900.2	Wheat	plasma membrane	65.0	65.0
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	66.18	64.47
Os02t0614100-01	Rice	plasma membrane	65.29	64.16
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	33.53	58.16
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	65.88	52.09
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	28.53	48.74
VIT_04s0069g00770.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane, plastid	24.41	25.62

Protein Annotations

EntrezGene:100256151	wikigene:100256151	MapMan:24.2.1.1.8	ProteinID:CCB46810	ProteinID:CCB46810.1	UniProt:F6H3H5
EMBL:FN595231	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015165	GO:GO:0016020	GO:GO:0016021	GO:GO:0090481	EntrezGene:LOC100256151	wikigene:LOC100256151
PFAM:PF03151	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI00015C856A
ArrayExpress:VIT_04s0008g05570	EnsemblPlantsGene:VIT_04s0008g05570	EnsemblPlants:VIT_04s0008g05570.t01	unigene:Vvi.2095	RefSeq:XP_002285174	RefSeq:XP_002285174.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:5048983..5059774

Molecular Weight (calculated)

37161.2 Da

IEP (calculated)

9.129

GRAVY (calculated)

0.750

Length

340 amino acids

Sequence
(BLAST)

001: MASSNSSKSP MLPISDPPRP DDKVFKGSAM SKRGAYAAIS YMSCAVLLVI FNKAALSSYH FPCASVITLF QIICSCSFLY ALRRWKIISF TLGESSNVND
101: GSPVFVPITT LIHTLPLAIT YLLYMLVTME SVRGVNVPMY TTLRRTTVVF TMFVEYILAG QRYTSSVVGS VGLIVLGAFI AGARDLSFDS YGYAVVFLSN
201: ITTAIYLATI ARIGKSSGLN SFGLMWCNGI LCGPILLLWT FIRGDLGMAM NFPHFFLPGF LVVLLLSCIL AFFLNYSIFL NTTLNSAVTQ TICGNLKDLF
301: TIGLGWMIFG GLPFDILNIT GQFLGFLGSG LYAYYKLIGK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.