Factsheet for VIT_11s0016g05710.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g05570.t01	Wine grape	plasma membrane, plastid	69.41	69.41
GSMUA_Achr4P09910_001	Banana	plasma membrane	62.35	68.39
Bra023959.1-P	Field mustard	peroxisome	65.29	64.72
Bra040073.1-P	Field mustard	peroxisome	65.0	64.24
PGSC0003DMT400079415	Potato	cytosol, peroxisome, plasma membrane	62.35	63.28
Solyc07g007990.2.1	Tomato	plasma membrane	62.35	62.91
Solyc01g009830.2.1	Tomato	cytosol, peroxisome, plasma membrane	61.76	62.13
HORVU6Hr1G056950.2	Barley	plasma membrane	62.06	62.06
AT2G14695.1	Thale cress	peroxisome	62.94	61.85
TraesCS6D01G205100.1	Wheat	plasma membrane	61.76	61.76
TraesCS6B01G251900.2	Wheat	plasma membrane	61.47	61.47
TraesCS6A01G229900.2	Wheat	plasma membrane	61.47	61.47
KRH54916	Soybean	cytosol, peroxisome, plasma membrane	60.88	61.06
CDY64678	Canola	plasma membrane	51.18	61.05
CDY32055	Canola	plasma membrane	50.88	60.7
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	61.18	59.77
Os02t0614100-01	Rice	plasma membrane	60.59	59.54
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	60.88	59.31
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	30.0	52.04
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	61.18	48.37
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	27.06	46.23
VIT_04s0069g00770.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane, plastid	24.71	25.93

Protein Annotations

EntrezGene:100250711	wikigene:100250711	MapMan:24.2.1.1.8	ProteinID:CBI28237	ProteinID:CBI28237.3	UniProt:D7TC52
EMBL:FN595756	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015165	GO:GO:0016020	GO:GO:0016021	GO:GO:0090481	EntrezGene:LOC100250711	wikigene:LOC100250711
PFAM:PF03151	PANTHER:PTHR44680	PANTHER:PTHR44680:SF1	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI00015C8F42
ArrayExpress:VIT_11s0016g05710	EnsemblPlantsGene:VIT_11s0016g05710	EnsemblPlants:VIT_11s0016g05710.t01	RefSeq:XP_002282363	RefSeq:XP_002282363.1	SEG:seg

Description

No Description!

Coordinates

chr11:+:5181377..5199428

Molecular Weight (calculated)

37220.1 Da

IEP (calculated)

8.838

GRAVY (calculated)

0.611

Length

340 amino acids

Sequence
(BLAST)

001: MEEATSTKSQ PLPVTDSPVA KESHRSAKGM TKRGVYAAIS YMVCAILLIL FNKAVLSSYN FPYANVITLF QTISSCLFLY VMRRWKIISF SAGQPESITD
101: DSATHVPIKT LVHTLPLASS YLLYMLITME SVRALNVPMY TTLRRTTVAF TMVVEYFLTG QKHSLAVLSS VGIIILGAFI AGARDLSFDS YGYAIVFVAN
201: ICTAVYLASI SRIGKSSGLS SFGLMWSNGI ICGPALLLWT AMNGDLEAMM NFPHLFSPGF QAMMLLSCIM AFFLNYFVFL NTTLNSALTQ TICGNLKDLF
301: TIGLGWLIFG GLPFDLLNVA GQSIGFLGSC LYAYCKLRGK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.