Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G229900.2 | Wheat | plasma membrane | 98.24 | 98.24 |
| TraesCS6D01G205100.1 | Wheat | plasma membrane | 98.24 | 98.24 |
| TraesCS6B01G251900.2 | Wheat | plasma membrane | 98.24 | 98.24 |
| Os02t0614100-01 | Rice | plasma membrane | 91.76 | 90.17 |
| EES05418 | Sorghum | cytosol, peroxisome, plasma membrane | 90.88 | 88.54 |
| Zm00001d051081_P002 | Maize | cytosol, peroxisome, plasma membrane | 89.71 | 87.64 |
| PGSC0003DMT400074812 | Potato | plasma membrane | 46.76 | 75.0 |
| GSMUA_Achr4P09910_001 | Banana | plasma membrane | 67.65 | 74.19 |
| Zm00001d017205_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 90.59 | 71.63 |
| CDY61397 | Canola | plasma membrane, plastid | 61.47 | 71.09 |
| Solyc08g066980.2.1 | Tomato | extracellular | 24.12 | 70.69 |
| Bra040073.1-P | Field mustard | peroxisome | 68.82 | 68.02 |
| CDY13477 | Canola | peroxisome | 67.65 | 67.06 |
| Bra023959.1-P | Field mustard | peroxisome | 67.65 | 67.06 |
| KRH05178 | Soybean | plastid | 67.06 | 66.09 |
| VIT_04s0008g05570.t01 | Wine grape | plasma membrane, plastid | 65.59 | 65.59 |
| KRH15879 | Soybean | plasma membrane, plastid | 66.18 | 65.22 |
| AT4G32272.2 | Thale cress | cytosol, peroxisome, plasma membrane | 66.18 | 62.67 |
| KRH52423 | Soybean | peroxisome | 63.53 | 62.25 |
| VIT_11s0016g05710.t01 | Wine grape | peroxisome | 62.06 | 62.06 |
| KRH61757 | Soybean | plasma membrane | 43.82 | 61.32 |
| PGSC0003DMT400079415 | Potato | cytosol, peroxisome, plasma membrane | 58.24 | 59.1 |
| Solyc07g007990.2.1 | Tomato | plasma membrane | 58.53 | 59.05 |
| GSMUA_Achr6P36420_001 | Banana | cytosol, peroxisome, plasma membrane | 33.82 | 58.67 |
| KRH54916 | Soybean | cytosol, peroxisome, plasma membrane | 57.94 | 58.11 |
| CDY53698 | Canola | plasma membrane | 67.65 | 58.08 |
| Solyc01g009830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.65 | 57.99 |
| CDY64678 | Canola | plasma membrane | 47.06 | 56.14 |
| AT2G14695.1 | Thale cress | peroxisome | 57.06 | 56.07 |
| CDY32055 | Canola | plasma membrane | 46.76 | 55.79 |
| CDX72350 | Canola | plasma membrane | 62.94 | 55.3 |
| Solyc08g066970.2.1 | Tomato | plastid | 30.59 | 55.03 |
| GSMUA_Achr6P36410_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 28.53 | 48.74 |
| HORVU7Hr1G031350.2 | Barley | plasma membrane | 25.59 | 26.93 |
| HORVU5Hr1G049270.1 | Barley | endoplasmic reticulum, plasma membrane, plastid | 25.0 | 26.81 |
| HORVU5Hr1G093740.1 | Barley | endoplasmic reticulum, extracellular, plastid | 8.82 | 22.06 |
Protein Annotations
| EMBL:AK362737 | EnsemblPlants:HORVU6Hr1G056950.2 | EnsemblPlantsGene:HORVU6Hr1G056950 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44680 | PANTHER:PTHR44680:SF2 | PFAM:PF03151 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002006149 | UniProt:F2DFS0 | MapMan:24.2.1.1.8 | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DFS0]
Coordinates
chrchr6H:+:368018456..368024842
Molecular Weight (calculated)
36893.9 Da
IEP (calculated)
9.526
GRAVY (calculated)
0.675
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKSAGGVLL PVSADAGKGD GEAALFKGSA MTRRGAVAAL SYMSCSVLLV MFNKAALSSY KFPCANVITL LQMVCSTCLL YVLRRLKIIS FTNSEPSVPS
101: DSLFFVPFRI LLRTSPLSLS YLLYMLASME SVRGVNVPMY TTLRRTTVAF TMTMEYFLAK QKHTPPIIGS VALIVFGAFI AGARDLSFDA RGYAIVFVAN
201: ITTAVYLATI NRIGKSSGLN SFGLMWCNGL VCGPAVLFLT YIQGDLKTTI EFPYLYSPGF QVVLLFSCIL AFLLNYTIFW NTILNSALTQ SMCGNLKDFF
301: TVGLGWVLFG GLPFDLLNVI GQGLGFVGSG MYAYCKIKGK
101: DSLFFVPFRI LLRTSPLSLS YLLYMLASME SVRGVNVPMY TTLRRTTVAF TMTMEYFLAK QKHTPPIIGS VALIVFGAFI AGARDLSFDA RGYAIVFVAN
201: ITTAVYLATI NRIGKSSGLN SFGLMWCNGL VCGPAVLFLT YIQGDLKTTI EFPYLYSPGF QVVLLFSCIL AFLLNYTIFW NTILNSALTQ SMCGNLKDFF
301: TVGLGWVLFG GLPFDLLNVI GQGLGFVGSG MYAYCKIKGK
001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR
Arabidopsis Description
Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.