CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15879	Soybean	plasma membrane, plastid	95.94	95.94
KRH52423	Soybean	peroxisome	80.58	80.12
PGSC0003DMT400074812	Potato	plasma membrane	48.99	79.72
Solyc08g066980.2.1	Tomato	extracellular	26.38	78.45
VIT_04s0008g05570.t01	Wine grape	plasma membrane, plastid	76.23	77.35
KRH61757	Soybean	plasma membrane	52.17	74.07
GSMUA_Achr4P09910_001	Banana	plasma membrane	66.09	73.55
Bra040073.1-P	Field mustard	peroxisome	72.17	72.38
Bra023959.1-P	Field mustard	peroxisome	70.43	70.85
HORVU6Hr1G056950.2	Barley	plasma membrane	66.09	67.06
TraesCS6A01G229900.2	Wheat	plasma membrane	66.09	67.06
TraesCS6B01G251900.2	Wheat	plasma membrane	65.8	66.76
TraesCS6D01G205100.1	Wheat	plasma membrane	65.8	66.76
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	66.09	65.33
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	65.51	64.94
Os02t0614100-01	Rice	plasma membrane	64.64	64.45
Solyc08g066970.2.1	Tomato	plastid	33.91	61.9
KRH54916	Soybean	cytosol, peroxisome, plasma membrane	59.42	60.47
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	33.62	59.18
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	65.22	52.33
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	27.25	47.24
KRH52610	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.8	27.55
KRH61951	Soybean	endoplasmic reticulum, extracellular, plasma membrane	8.99	20.13

Protein Annotations

EMBL:ACUP02010683	EnsemblPlants:KRH05178	EnsemblPlantsGene:GLYMA_17G211500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0015165	GO:GO:0016020	GO:GO:0016021	GO:GO:0090481
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	ProteinID:KRH05178	ProteinID:KRH05178.1
TMHMM:TMhelix	UniParc:UPI000233DF55	UniProt:I1MWS9	MapMan:24.2.1.1.8	:	:

Description

hypothetical protein

Coordinates

chr17:+:34916813..34922875

Molecular Weight (calculated)

38105.2 Da

IEP (calculated)

9.160

GRAVY (calculated)

0.679

Length

345 amino acids

Sequence
(BLAST)

001: MSLKPSNSSE NLMLPVSDPP KSHDADDKLF KGSAMTKRGA FAAVSYMSCA VLLVMFNKAA LSSYNFPSAN VITLLQMVCS CCFLYLLRRW RMISFSTGES
101: LHISDNSTKF VSLKTLKHTL PLSGAYLFYM LVTMESVRGV NVPMYTTLRR TTVVFTMLVE FVLVGQRYTP SVIFSVGLIV FGAFVAGARD LSFDAYGYAV
201: VFMSNIATAI YLATIARIGK TSGLNSFGLM WCNGIICGPV LLIWTFVRGD LMTTINFPYL FSPGFIVILL FSCVLAFFLN YCIFLNTTLN SAVTQTICGN
301: LKDLFTIGLG WIIFGGLPFD FWNIIGQFLG FAGSGLYAYY KLIGK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.