Factsheet for Bra023959.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13477	Canola	peroxisome	99.13	99.13
Bra040073.1-P	Field mustard	peroxisome	86.01	85.76
AT4G32272.2	Thale cress	cytosol, peroxisome, plasma membrane	85.71	81.89
CDX72350	Canola	plasma membrane	85.71	75.97
PGSC0003DMT400074812	Potato	plasma membrane	46.65	75.47
GSMUA_Achr4P09910_001	Banana	plasma membrane	66.76	73.87
Solyc08g066980.2.1	Tomato	extracellular	24.78	73.28
KRH15879	Soybean	plasma membrane, plastid	71.14	70.72
KRH05178	Soybean	plastid	70.85	70.43
VIT_04s0008g05570.t01	Wine grape	plasma membrane, plastid	69.39	70.0
HORVU6Hr1G056950.2	Barley	plasma membrane	67.06	67.65
TraesCS6A01G229900.2	Wheat	plasma membrane	67.06	67.65
TraesCS6D01G205100.1	Wheat	plasma membrane	66.76	67.35
TraesCS6B01G251900.2	Wheat	plasma membrane	66.76	67.35
Os02t0614100-01	Rice	plasma membrane	67.93	67.34
KRH52423	Soybean	peroxisome	67.93	67.15
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	68.22	67.05
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	67.06	66.09
VIT_11s0016g05710.t01	Wine grape	peroxisome	64.72	65.29
KRH61757	Soybean	plasma membrane	44.61	62.96
KRH54916	Soybean	cytosol, peroxisome, plasma membrane	59.77	60.47
PGSC0003DMT400079415	Potato	cytosol, peroxisome, plasma membrane	58.02	59.4
Solyc07g007990.2.1	Tomato	plasma membrane	58.31	59.35
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	33.53	58.67
Solyc01g009830.2.1	Tomato	cytosol, peroxisome, plasma membrane	57.73	58.58
Solyc08g066970.2.1	Tomato	plastid	30.9	56.08
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	67.93	54.19
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	27.11	46.73
Bra010229.1-P	Field mustard	plasma membrane	26.53	23.16

Protein Annotations

EnsemblPlants:Bra023959.1	EnsemblPlants:Bra023959.1-P	EnsemblPlantsGene:Bra023959	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002540FEB	UniProt:M4E5A5	MapMan:24.2.1.1.8	:	:	:

Description

AT4G32272 (E=1e-161) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related (TAIR:AT4G31600.1); Has 1302 Blast hits to 1300 proteins in 174 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 239; Plants - 567; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).

Coordinates

chrA03:-:28581436..28583288

Molecular Weight (calculated)

37715.7 Da

IEP (calculated)

9.115

GRAVY (calculated)

0.638

Length

343 amino acids

Sequence
(BLAST)

001: MMNPVLPVSD PPLAGENNLD GKGVVEDNRL FKGSAMTKRG TYAALSYMAC AVMLVLFNKA ALSSYHFPCV NVITLFQMVS STLFLYTLRR KKIISFTAAD
101: SDNNVSAFVP LKTLFHTLPL SAAYLLYMLA TMASVRGVNV PMYTTLRRTT VAFTMVIEYL LTGQRYTRSI IGSVGVILFG AFFAGARDLS FDFYGYGVVF
201: LANITTAVYL ATISRTGKSS GLNSFGLMWC NGIICGPILM IWTYVCGDLE RTINFPHLFS PGFMVVLLCS CVLAFFLNYS IFLNTTLNSA LTQTICGNMK
301: DVFTVGLGWL LFGGLPFDLM NVIGQLFGFF GSGLYAYYKI IGR

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.