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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d051081_P002 Maize cytosol, peroxisome, plasma membrane 96.85 97.13
Os02t0614100-01 Rice plasma membrane 91.4 92.2
TraesCS6B01G251900.2 Wheat plasma membrane 88.54 90.88
HORVU6Hr1G056950.2 Barley plasma membrane 88.54 90.88
TraesCS6D01G205100.1 Wheat plasma membrane 87.97 90.29
TraesCS6A01G229900.2 Wheat plasma membrane 87.97 90.29
Zm00001d017205_P001 Maize cytosol, endoplasmic reticulum, peroxisome 96.56 78.37
PGSC0003DMT400074812 Potato plasma membrane 46.13 75.94
GSMUA_Achr4P09910_001 Banana plasma membrane 66.48 74.84
CDY61397 Canola plasma membrane, plastid 60.17 71.43
Solyc08g066980.2.1 Tomato extracellular 23.21 69.83
Bra040073.1-P Field mustard peroxisome 68.77 69.77
Bra023959.1-P Field mustard peroxisome 67.05 68.22
CDY13477 Canola peroxisome 67.05 68.22
VIT_04s0008g05570.t01 Wine grape plasma membrane, plastid 64.47 66.18
KRH05178 Soybean plastid 65.33 66.09
KRH15879 Soybean plasma membrane, plastid 64.47 65.22
AT4G32272.2 Thale cress cytosol, peroxisome, plasma membrane 65.9 64.07
KRH52423 Soybean peroxisome 61.89 62.25
KRH61757 Soybean plasma membrane 43.27 62.14
GSMUA_Achr6P36420_001 Banana cytosol, peroxisome, plasma membrane 34.38 61.22
VIT_11s0016g05710.t01 Wine grape peroxisome 59.31 60.88
PGSC0003DMT400079415 Potato cytosol, peroxisome, plasma membrane 57.31 59.7
KRH54916 Soybean cytosol, peroxisome, plasma membrane 57.88 59.59
Solyc07g007990.2.1 Tomato plasma membrane 57.31 59.35
CDY53698 Canola plasma membrane 67.34 59.34
Solyc01g009830.2.1 Tomato cytosol, peroxisome, plasma membrane 57.02 58.88
CDX72350 Canola plasma membrane 62.18 56.07
Solyc08g066970.2.1 Tomato plastid 30.09 55.56
AT2G14695.1 Thale cress peroxisome 55.01 55.49
CDY64678 Canola plasma membrane 44.99 55.09
CDY32055 Canola plasma membrane 44.99 55.09
GSMUA_Achr6P36410_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 26.93 47.24
EER89355 Sorghum cytosol, endoplasmic reticulum, plasma membrane 25.79 27.86
Protein Annotations
MapMan:24.2.1.1.8EntrezGene:8072459UniProt:C5XXM5EnsemblPlants:EES05418ProteinID:EES05418ProteinID:EES05418.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015165
GO:GO:0016020GO:GO:0016021GO:GO:0090481PFAM:PF03151PANTHER:PTHR44680PANTHER:PTHR44680:SF2
EnsemblPlantsGene:SORBI_3004G214100unigene:Sbi.16842InterPro:Sugar_P_trans_domTMHMM:TMhelixUniParc:UPI0001A852DFRefSeq:XP_002452442.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:+:56389819..56395087
Molecular Weight (calculated)
37703.7 Da
IEP (calculated)
9.296
GRAVY (calculated)
0.603
Length
349 amino acids
Sequence
(BLAST)
001: MAKGGGERGA LLPVSADDDG KGNGGGGGGD DAVLFKGSAM TRRGAAAALS YMACSVLLVM FNKAALSSYN FPCANVITLL QMVCSTCLLY VLRRLKIISF
101: TNSDPSVPSD SLFFVPFRLL LRTTPLSLAY LLYMLASMES VRGVNVPMYT TLRRTTVVFT MTMEYFLAKQ KHTPPIIGSV ALIVFGAFVA GARDLSFDAR
201: GYAIVFVANI TTAVYLATIN RIGKSSGLNS FGLMWCNGLV CGPSVLFLTY IQGDLRRTVE FPYLYSPGFM VVLLFSCILA FLLNYTIFWN TILNSALTQS
301: MCGNLKDFFT VGIGWVLFGG LPFDLLNVIG QGLGFLGSGL YAYCKIKGK
Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)
001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR
Arabidopsis Description
Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.