Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61397 | Canola | plasma membrane, plastid | 65.89 | 86.73 |
| CDY13477 | Canola | peroxisome | 76.74 | 86.59 |
| Bra023959.1-P | Field mustard | peroxisome | 75.97 | 85.71 |
| AT4G32272.2 | Thale cress | cytosol, peroxisome, plasma membrane | 70.54 | 76.04 |
| GSMUA_Achr4P09910_001 | Banana | plasma membrane | 58.14 | 72.58 |
| CDY53698 | Canola | plasma membrane | 70.03 | 68.43 |
| TraesCS6A01G229900.2 | Wheat | plasma membrane | 55.56 | 63.24 |
| TraesCS6B01G251900.2 | Wheat | plasma membrane | 55.56 | 63.24 |
| HORVU6Hr1G056950.2 | Barley | plasma membrane | 55.3 | 62.94 |
| TraesCS6D01G205100.1 | Wheat | plasma membrane | 55.3 | 62.94 |
| EES05418 | Sorghum | cytosol, peroxisome, plasma membrane | 56.07 | 62.18 |
| Os02t0614100-01 | Rice | plasma membrane | 55.04 | 61.56 |
| Zm00001d051081_P002 | Maize | cytosol, peroxisome, plasma membrane | 55.04 | 61.21 |
| CDY64678 | Canola | plasma membrane | 39.28 | 53.33 |
| CDY32055 | Canola | plasma membrane | 39.02 | 52.98 |
| GSMUA_Achr6P36420_001 | Banana | cytosol, peroxisome, plasma membrane | 26.1 | 51.53 |
| Zm00001d017205_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 55.3 | 49.77 |
| GSMUA_Achr6P36410_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 23.77 | 46.23 |
| CDY57885 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.51 | 28.17 |
| CDY65657 | Canola | cytosol, plasma membrane, vacuole | 23.26 | 27.86 |
Protein Annotations
| EnsemblPlants:CDX72350 | EnsemblPlantsGene:GSBRNA2T00099842001 | GO:A0A078C677 | PANTHER:PTHR44680 | PANTHER:PTHR44680:SF2 | ProteinID:CDX72350 |
| ProteinID:CDX72350.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE7389 | MapMan:24.2.1.1.8 | : |
Description
BnaC07g43720D
Coordinates
chrLK031796:-:805531..807917
Molecular Weight (calculated)
42336.1 Da
IEP (calculated)
8.577
GRAVY (calculated)
0.579
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKRGAYAAL SYMACAADIN VKVSCFEIMS VLMLVLFNKA ALSSYEFPCV NVITLFQILS STLFLYTLRR KKIISFTAAD SFSASDNNNN NVSAFVPLKT
101: LFHTLPPSAA YLLYMLATMA SVRGVNVPMY TTLRRTTVAF TMVIDGPLHP GGLYLGWGQD PTPSTAFGDR MGSSPPPGVE PVSMTIGPQS PYQVSYLILS
201: IEYLLTGQRY TRSIIGSVGV ILFGAFFAGA RDLSFEFYGY GVVFLANITT AVYLATISRT GKSSGLNSFG LMWCNGIICG PILIIWTYVC GDLERTFNFP
301: HLFSPGFMVV LLCSCVLAFF LNYSIFLNTT LNSALTQTIC GNMKDVFTVG LGWMLFGGLP FDLMNVIGQL FGFFGSGLYA YYKIIGR
101: LFHTLPPSAA YLLYMLATMA SVRGVNVPMY TTLRRTTVAF TMVIDGPLHP GGLYLGWGQD PTPSTAFGDR MGSSPPPGVE PVSMTIGPQS PYQVSYLILS
201: IEYLLTGQRY TRSIIGSVGV ILFGAFFAGA RDLSFEFYGY GVVFLANITT AVYLATISRT GKSSGLNSFG LMWCNGIICG PILIIWTYVC GDLERTFNFP
301: HLFSPGFMVV LLCSCVLAFF LNYSIFLNTT LNSALTQTIC GNMKDVFTVG LGWMLFGGLP FDLMNVIGQL FGFFGSGLYA YYKIIGR
001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VLVFSRIRFS GFRSSFMLVL FNKAALSSYD FPCVNVITLF QMVSSSLFLY
101: ALRRRKIISF TAADSFSIDS ASTFVPVKTL FHTLPLAIAY LLYMLASMAS VRGVNVPMYT TLRRTTVAFT MVIEYMLTGQ RYTRSIIGSV GIILLGAFFA
201: GARDLSFDFY GYGVVFLANI STAVYLATIA RTGKSSGLNS FGLMWSNGII CGPILMIWTF ICGDLEKTIN FPHLLTPGFM VVLLCSCVLA FVLNYCIFLN
301: TTLNSALTQT ICGNMKDLFT VGLGWMLFGG LPFDLMNVIG QLFGFFGSGL YAYYKIIGR
101: ALRRRKIISF TAADSFSIDS ASTFVPVKTL FHTLPLAIAY LLYMLASMAS VRGVNVPMYT TLRRTTVAFT MVIEYMLTGQ RYTRSIIGSV GIILLGAFFA
201: GARDLSFDFY GYGVVFLANI STAVYLATIA RTGKSSGLNS FGLMWSNGII CGPILMIWTF ICGDLEKTIN FPHLLTPGFM VVLLCSCVLA FVLNYCIFLN
301: TTLNSALTQT ICGNMKDLFT VGLGWMLFGG LPFDLMNVIG QLFGFFGSGL YAYYKIIGR
Arabidopsis Description
Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.