Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- peroxisome 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g066980.2.1 | Tomato | extracellular | 29.03 | 77.59 |
| PGSC0003DMT400074812 | Potato | plasma membrane | 52.9 | 77.36 |
| CDY61397 | Canola | plasma membrane, plastid | 69.03 | 72.79 |
| TraesCS6B01G251900.2 | Wheat | plasma membrane | 74.52 | 67.94 |
| HORVU6Hr1G056950.2 | Barley | plasma membrane | 74.19 | 67.65 |
| VIT_04s0008g05570.t01 | Wine grape | plasma membrane, plastid | 73.87 | 67.35 |
| TraesCS6A01G229900.2 | Wheat | plasma membrane | 73.87 | 67.35 |
| TraesCS6D01G205100.1 | Wheat | plasma membrane | 73.55 | 67.06 |
| Bra023959.1-P | Field mustard | peroxisome | 73.87 | 66.76 |
| CDY13477 | Canola | peroxisome | 73.87 | 66.76 |
| EES05418 | Sorghum | cytosol, peroxisome, plasma membrane | 74.84 | 66.48 |
| Zm00001d051081_P002 | Maize | cytosol, peroxisome, plasma membrane | 74.19 | 66.09 |
| KRH05178 | Soybean | plastid | 73.55 | 66.09 |
| Bra040073.1-P | Field mustard | peroxisome | 73.23 | 65.99 |
| Os02t0614100-01 | Rice | plasma membrane | 73.23 | 65.61 |
| KRH15879 | Soybean | plasma membrane, plastid | 72.26 | 64.93 |
| KRH61757 | Soybean | plasma membrane | 49.35 | 62.96 |
| AT4G32272.2 | Thale cress | cytosol, peroxisome, plasma membrane | 72.26 | 62.4 |
| VIT_11s0016g05710.t01 | Wine grape | peroxisome | 68.39 | 62.35 |
| KRH52423 | Soybean | peroxisome | 69.68 | 62.25 |
| GSMUA_Achr6P36420_001 | Banana | cytosol, peroxisome, plasma membrane | 39.35 | 62.24 |
| PGSC0003DMT400079415 | Potato | cytosol, peroxisome, plasma membrane | 66.77 | 61.79 |
| Solyc07g007990.2.1 | Tomato | plasma membrane | 66.13 | 60.83 |
| Solyc01g009830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 66.13 | 60.65 |
| CDX72350 | Canola | plasma membrane | 72.58 | 58.14 |
| CDY53698 | Canola | plasma membrane | 73.23 | 57.32 |
| KRH54916 | Soybean | cytosol, peroxisome, plasma membrane | 62.26 | 56.93 |
| GSMUA_Achr6P36410_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 35.81 | 55.78 |
| AT2G14695.1 | Thale cress | peroxisome | 61.94 | 55.49 |
| CDY64678 | Canola | plasma membrane | 50.97 | 55.44 |
| CDY32055 | Canola | plasma membrane | 50.97 | 55.44 |
| Zm00001d017205_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 74.52 | 53.72 |
| Solyc08g066970.2.1 | Tomato | plastid | 30.32 | 49.74 |
| GSMUA_Achr6P03950_001 | Banana | mitochondrion, plasma membrane, plastid | 28.71 | 22.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P09910_001 | EnsemblPlants:GSMUA_Achr4T09910_001 | EnsemblPlantsGene:GSMUA_Achr4G09910_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Sugar_P_trans_dom | PANTHER:PTHR44680 | PANTHER:PTHR44680:SF2 | PFAM:PF03151 | SEG:seg | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI000294A191 | UniProt:M0SMK8 | MapMan:24.2.1.1.8 | : | : |
Description
Putative UDP-sugar transporter sqv-7 [Source:GMGC_GENE;Acc:GSMUA_Achr4G09910_001]
Coordinates
chr4:-:7203514..7210382
Molecular Weight (calculated)
34445.0 Da
IEP (calculated)
9.161
GRAVY (calculated)
0.738
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRRGAFAAV SYMACAVLLV LFNKAALSSY NFPCANVITL FQMISSTCIL YAMRRWRIIS FTNGEPHKGS FVPLETIFHT LPLSIAYLLY MLATMESVRG
101: VNVPMYTTLR RTTVMFTMIV EYLLTRQKYT HPVVGSVALI VLGAFVAGAR DLSFDAYGYG MVFIANMTTA IYLATINRVG KSSGLNSFGL MWCNGIVCGP
201: ILLFWTYIRG DLELTMNFPY LHSLGFQAGF FVVMIFSCIL AFFLNYCIFL NTTLNSALTQ TMCGNLKDLF TVGLGWLLFG GLPFDVLNII GQVLGFVGSG
301: FYAYCKIKGK
101: VNVPMYTTLR RTTVMFTMIV EYLLTRQKYT HPVVGSVALI VLGAFVAGAR DLSFDAYGYG MVFIANMTTA IYLATINRVG KSSGLNSFGL MWCNGIVCGP
201: ILLFWTYIRG DLELTMNFPY LHSLGFQAGF FVVMIFSCIL AFFLNYCIFL NTTLNSALTQ TMCGNLKDLF TVGLGWLLFG GLPFDVLNII GQVLGFVGSG
301: FYAYCKIKGK
001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR
Arabidopsis Description
Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.