CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040073.1-P	Field mustard	peroxisome	99.66	85.17
CDY13477	Canola	peroxisome	87.42	74.93
CDY53698	Canola	plasma membrane	97.96	72.73
AT4G32272.2	Thale cress	cytosol, peroxisome, plasma membrane	86.73	71.03
GSMUA_Achr4P09910_001	Banana	plasma membrane	72.79	69.03
CDX72350	Canola	plasma membrane	86.73	65.89
TraesCS6A01G229900.2	Wheat	plasma membrane	71.77	62.06
TraesCS6B01G251900.2	Wheat	plasma membrane	71.77	62.06
TraesCS6D01G205100.1	Wheat	plasma membrane	71.43	61.76
HORVU6Hr1G056950.2	Barley	plasma membrane	71.09	61.47
Os02t0614100-01	Rice	plasma membrane	71.09	60.4
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	71.43	60.17
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	71.09	60.06
CDY64678	Canola	plasma membrane	48.98	50.53
CDY32055	Canola	plasma membrane	48.3	49.82
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	70.75	48.37
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	31.97	47.24
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	29.59	44.39
CDY57885	Canola	endoplasmic reticulum, plasma membrane, vacuole	28.91	26.32
CDY65657	Canola	cytosol, plasma membrane, vacuole	28.91	26.32

Protein Annotations

EnsemblPlants:CDY61397	EnsemblPlantsGene:GSBRNA2T00033779001	GO:A0A078J534	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	ProteinID:CDY61397	ProteinID:CDY61397.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE2E3B	UniProt:A0A078J534	MapMan:24.2.1.1.8	:

Description

BnaA08g30680DBnaA08g30680D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J534]

Coordinates

chrLK033992:-:38897..40962

Molecular Weight (calculated)

32369.5 Da

IEP (calculated)

9.526

GRAVY (calculated)

0.830

Length

294 amino acids

Sequence
(BLAST)

001: MLVLFNKAAL SSYQFPCVNV ITLFQMVSST FFLYSLRRKK IISFIAADSF SGSGSTSAFV PLKTLLHTLP LSIAYLMYML ASMASVRGVN VPMYTTLRRT
101: TVAFTMVIEY MLTGQRYTRS IIGSVGVIIF GAFFAGARDL SFDFYGYGVV FLANITTAIY LATIARIGKS SGLNSFGLMW CNGIICGPIL MIWTFMSGDL
201: EKTISFPYLF SPGFMVVLLC SCVLAFFLNY SIFLNTTLNS ALTQTICGNM KDLFTVGLGW MVFGGLPFDL MNVIGQLLGF LGSGLYAYYK IIGK

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.