CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 1
peroxisome 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023959.1-P	Field mustard	peroxisome	99.13	99.13
CDY61397	Canola	plasma membrane, plastid	74.93	87.42
AT4G32272.2	Thale cress	cytosol, peroxisome, plasma membrane	85.42	81.62
CDX72350	Canola	plasma membrane	86.59	76.74
GSMUA_Achr4P09910_001	Banana	plasma membrane	66.76	73.87
CDY53698	Canola	plasma membrane	83.67	72.47
HORVU6Hr1G056950.2	Barley	plasma membrane	67.06	67.65
TraesCS6A01G229900.2	Wheat	plasma membrane	67.06	67.65
TraesCS6B01G251900.2	Wheat	plasma membrane	66.76	67.35
TraesCS6D01G205100.1	Wheat	plasma membrane	66.76	67.35
Os02t0614100-01	Rice	plasma membrane	67.93	67.34
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	68.22	67.05
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	66.76	65.8
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	33.82	59.18
CDY64678	Canola	plasma membrane	45.77	55.09
CDY32055	Canola	plasma membrane	45.48	54.74
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	67.64	53.95
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	27.11	46.73
CDY57885	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.24	27.86
CDY65657	Canola	cytosol, plasma membrane, vacuole	26.24	27.86

Protein Annotations

EnsemblPlants:CDY13477	EnsemblPlantsGene:GSBRNA2T00077779001	GO:A0A078FKF6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Sugar_P_trans_dom	PANTHER:PTHR44680	PANTHER:PTHR44680:SF2	PFAM:PF03151	ProteinID:CDY13477	ProteinID:CDY13477.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EED231	UniProt:A0A078FKF6	MapMan:24.2.1.1.8	:

Description

BnaA03g51950DBnaA03g51950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKF6]

Coordinates

chrLK032035:-:566959..568992

Molecular Weight (calculated)

37681.7 Da

IEP (calculated)

9.115

GRAVY (calculated)

0.653

Length

343 amino acids

Sequence
(BLAST)

001: MMNPVLPVSD PPLAGENNLD GKGVVEDNRL FKGSAMTKRG AYAALSYMAC AVMLVLFNKA ALSSYHFPCV NVITLFQMVS STLFLYTLRR KKIISFTAAD
101: SDNNVSAFVP LKTLFHTLPL SAAYLLYMLA TMASVRGVNV PMYTTLRRTT VAFTMVIEYL LTGQRYTRSI IGSVGVILFG AFFAGARDLS FEFYGYGVVF
201: LANITTAVYL ATISRTGKSS GLNSFGLMWC NGIICGPILI IWTYVCGDLE RTINFPHLFS PGFMVVLLCS CVLAFFLNYS IFLNTTLNSA LTQTICGNMK
301: DVFTVGLGWL LFGGLPFDLM NVIGQLFGFF GSGLYAYYKI IGR

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.