CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P09910_001	Banana	plasma membrane	56.93	62.26
VIT_11s0016g05710.t01	Wine grape	peroxisome	61.06	60.88
Bra023959.1-P	Field mustard	peroxisome	60.47	59.77
KRH05178	Soybean	plastid	60.47	59.42
Bra040073.1-P	Field mustard	peroxisome	60.18	59.3
KRH15879	Soybean	plasma membrane, plastid	59.29	58.26
TraesCS6D01G205100.1	Wheat	plasma membrane	58.11	57.94
HORVU6Hr1G056950.2	Barley	plasma membrane	58.11	57.94
EES05418	Sorghum	cytosol, peroxisome, plasma membrane	59.59	57.88
Os02t0614100-01	Rice	plasma membrane	59.0	57.8
Solyc01g009830.2.1	Tomato	cytosol, peroxisome, plasma membrane	57.52	57.69
TraesCS6B01G251900.2	Wheat	plasma membrane	57.82	57.65
TraesCS6A01G229900.2	Wheat	plasma membrane	57.82	57.65
PGSC0003DMT400079415	Potato	cytosol, peroxisome, plasma membrane	56.93	57.61
Zm00001d051081_P002	Maize	cytosol, peroxisome, plasma membrane	59.0	57.47
Solyc07g007990.2.1	Tomato	plasma membrane	56.93	57.27
KRH52423	Soybean	peroxisome	58.41	57.06
AT2G14695.1	Thale cress	peroxisome	57.52	56.36
KRH61757	Soybean	plasma membrane	39.23	54.73
CDY64678	Canola	plasma membrane	45.72	54.39
CDY32055	Canola	plasma membrane	45.13	53.68
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	29.79	51.53
Zm00001d017205_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	59.59	46.98
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	23.89	40.7
KRH52610	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.66	26.93
KRH61951	Soybean	endoplasmic reticulum, extracellular, plasma membrane	9.73	21.43

Protein Annotations

EntrezGene:100794308	MapMan:24.2.1.1.8	UniProt:A0A0R0JUA6	EMBL:ACUP02003596	EnsemblPlantsGene:GLYMA_06G218500	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015165	GO:GO:0016020
GO:GO:0016021	GO:GO:0090481	EnsemblPlants:KRH54916	ProteinID:KRH54916	ProteinID:KRH54916.1	PFAM:PF03151
PANTHER:PTHR44680	PANTHER:PTHR44680:SF1	InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI0002339CE0	SEG:seg

Description

hypothetical protein

Coordinates

chr6:-:23640500..23650405

Molecular Weight (calculated)

37620.7 Da

IEP (calculated)

9.562

GRAVY (calculated)

0.715

Length

339 amino acids

Sequence
(BLAST)

001: MESEKNLRLP LSDDRNQRDE RQRKVSAMTR RGVFAALSYM ASSVLLVMFN KAALSSYNFP FANVITLAQM VFAFIILYVL RSLKIISFTA GESLSSSKNT
101: IIFVSYRTLA QTLPLALTYL LFMVVTMEAV RGINIPMYTT LRRTVVAFTM VMEYFLSGQT HSRFVVGSVG IIIAGAFVAG ARDLAFDAFS YSVVFVENMC
201: KAVYLASVSR VGKSSGLNIF GIVWCNVVIC GPILFLWSLL RGDLQATLNF PYFFSRGFQV VMLLSCAFTF FINYIVVLNT TINSALTQAI CGNLKDVFTS
301: GIGWLLFGGL PYDLFNILGQ VLGFLGSCLY AYCKLMQAV

Best Arabidopsis Sequence Match ( AT4G32272.1 )
(BLAST)

001: MRNNPVLPVS DPPLAGENDS DGKGVDDRLF KGSAMTKRGA YAALSYMACA VMLVLFNKAA LSSYDFPCVN VITLFQMVSS SLFLYALRRR KIISFTAADS
101: FSIDSASTFV PVKTLFHTLP LAIAYLLYML ASMASVRGVN VPMYTTLRRT TVAFTMVIEY MLTGQRYTRS IIGSVGIILL GAFFAGARDL SFDFYGYGVV
201: FLANISTAVY LATIARTGKS SGLNSFGLMW SNGIICGPIL MIWTFICGDL EKTINFPHLL TPGFMVVLLC SCVLAFVLNY CIFLNTTLNS ALTQTICGNM
301: KDLFTVGLGW MLFGGLPFDL MNVIGQLFGF FGSGLYAYYK IIGR

Arabidopsis Description

Nucleotide/sugar transporter family protein [Source:UniProtKB/TrEMBL;Acc:F4JU87]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.