Factsheet for GSMUA_Achr6P03950_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0069g00770.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane, plastid	65.57	79.94
Solyc12g096340.1.1	Tomato	plasma membrane	58.99	78.19
PGSC0003DMT400075533	Potato	endoplasmic reticulum, plasma membrane, vacuole	62.78	77.5
EER89355	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	63.29	77.4
Zm00001d045074_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	63.29	77.4
KRH52610	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	63.04	77.09
TraesCS7B01G057100.1	Wheat	plasma membrane	62.78	76.78
AT4G31600.1	Thale cress	cytosol, plasma membrane, vacuole	62.78	76.78
CDY65657	Canola	cytosol, plasma membrane, vacuole	62.53	76.47
TraesCSU01G104100.1	Wheat	plasma membrane	62.53	76.47
TraesCS7A01G153000.1	Wheat	plasma membrane	62.53	76.47
CDY57885	Canola	endoplasmic reticulum, plasma membrane, vacuole	62.03	75.85
HORVU7Hr1G031350.2	Barley	plasma membrane	62.03	75.85
Zm00001d000026_P001	Maize	plasma membrane	49.11	75.78
HORVU5Hr1G049270.1	Barley	endoplasmic reticulum, plasma membrane, plastid	60.76	75.71
Os06t0188100-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	61.77	75.54
Zm00001d025454_P001	Maize	plasma membrane	48.86	75.39
HORVU5Hr1G093740.1	Barley	endoplasmic reticulum, extracellular, plastid	23.8	69.12
Zm00001d044684_P001	Maize	extracellular, plasma membrane, vacuole	36.96	67.28
Bra010229.1-P	Field mustard	plasma membrane	62.53	62.85
KRH61951	Soybean	endoplasmic reticulum, extracellular, plasma membrane	23.8	61.04
Zm00001d047943_P001	Maize	plasma membrane	20.76	53.25
GSMUA_Achr4P09910_001	Banana	plasma membrane	22.53	28.71
GSMUA_Achr6P36410_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	11.14	22.11
GSMUA_Achr6P36420_001	Banana	cytosol, peroxisome, plasma membrane	10.38	20.92

Protein Annotations

MapMan:24.2.1.1.8	GO:GO:0003674	GO:GO:0005215	GO:GO:0005459	GO:GO:0005460	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0009653	GO:GO:0009791	GO:GO:0009987	GO:GO:0015785	GO:GO:0015786
GO:GO:0016020	GO:GO:0016021	GO:GO:0030154	GO:GO:0048527	GO:GO:0072334	GO:GO:0080147
EnsemblPlantsGene:GSMUA_Achr6G03950_001	EnsemblPlants:GSMUA_Achr6P03950_001	EnsemblPlants:GSMUA_Achr6T03950_001	UniProt:M0T3Z3	PFAM:PF03151	PANTHER:PTHR44748
InterPro:Sugar_P_trans_dom	TMHMM:TMhelix	UniParc:UPI0002952C0F	SEG:seg	:	:

Description

transporter family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G03950_001]

Coordinates

chr6:+:2723558..2728636

Molecular Weight (calculated)

43127.7 Da

IEP (calculated)

10.178

GRAVY (calculated)

0.595

Length

395 amino acids

Sequence
(BLAST)

001: MGSHRGSDGW IQKPRHLFPP CSPPLLLFFT DWLLPSSYSP FPALTLTVHN QGRNQRSRVS LFKVSSIGIA MEGRVDLEPT PFLSLFAAFS YGIASMAMVF
101: INKAVLMQYA YSMTLLTLQQ LATTLLIHFG KVMGYTKAKA VNMPTAKKLL PVSVFYNANV AFALASLKGV NIPMYIALKR LTPLAVLVFG FFRGKSRPST
201: QVSLSVIFTA IGVVIAALGD FSFDLHGYTM ALTSVFFQTM YLVLVEKSGA EDGLSSVEIM FYNSLLSLPF LLFLIIATGE FPHSVAVLSG KAYSFAFLVI
301: LVISLIMGIV LNYTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVQ VHALNVTGLV INTAGGVWYS YAKYQQKKKI PRKVLSEEEQ LKNTN

Best Arabidopsis Sequence Match ( AT4G31600.1 )
(BLAST)

001: MEVQAEMEPT SSISLVAAVS YGIASMAMVF INKAVIMQYP HSMTVLTLQQ LATSLLIHFG RRMGYTRAKG IDMATAKKLL PVSIFYNANV AFALASLKGV
101: NIPMYIAIKR LTPLAVLISG VLFGKGKPTT QVALSVLLTA AGCVIAALGD FSFDLFGYGL ALTSVFFQTM YLVLVEKSGA EDGLSSIEIM FYNSFLSLPF
201: LSILIIVTGE FPNSLSLLLA KCSYLPFLVI LILSLVMGIV LNFTMFLCTI VNSALTTTIV GVLKGVGSTT LGFVLLGGVE VHALNVSGLV VNTAGGVWYS
301: YAKYRQKKAK PAKLMSDLEA HKK

Arabidopsis Description

UTR7UDP-galactose/UDP-glucose transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q94B65]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.